RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 NLRX1Q86UT6 975 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 ITFG1Q8TB96 612 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 SCUBE2Q9NQ36 999 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 TEP1Q99973 2627 aaKnown RBP16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 COL4A2P08572 1712 aa16.28■□□□□ 0.2
SYNCRIP-203ENST00000444272 FAM221BA6H8Z2 402 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 TGM5O43548 720 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 GPR32O75388 356 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 VTNP04004 478 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 SOD2P04179 222 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 CHRNB1P11230 501 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 LONRF3Q496Y0 759 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 ASPRV1Q53RT3 343 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 LPPQ93052 612 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 CRELD1Q96HD1 420 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 ZKSCAN3Q9BRR0 538 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 CCDC86Q9H6F5 360 aaKnown RBP16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 C2orf42Q9NWW7 574 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 SSX2IPQ9Y2D8 614 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 RAXQ9Y2V3 346 aa16.27■□□□□ 0.2
SYNCRIP-203ENST00000444272 TEX15Q9BXT5 2789 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 TK2O00142 265 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 CCDC192P0DO97 292 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 TAS1R1Q7RTX1 841 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZNF280BQ86YH2 543 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 CHCHD4Q8N4Q1 142 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 TMEM9BQ9NQ34 198 aa16.26■□□□□ 0.19
SYNCRIP-203ENST00000444272 APC2O95996 2303 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 SPAARA0A1B0GVQ0 90 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 ECI2O75521 394 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZMYND10O75800 440 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 UAP1L1Q3KQV9 507 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 NOMO2Q5JPE7 1267 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 PCNX4Q63HM2 1172 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 HERC2P3Q9BVR0 1158 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 RXFP1Q9HBX9 757 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 RBM12Q9NTZ6 932 aaKnown RBP16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 COL12A1Q99715 3063 aa16.25■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZBTB5O15062 677 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 GLUD2P49448 558 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 STAT5BP51692 787 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 SIM1P81133 766 aaPredicted RBP16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 PTGDRQ13258 359 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 GLB1LQ6UWU2 654 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 Q6ZS52 159 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 NPAS3Q8IXF0 933 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 MDM1Q8TC05 714 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 RSPH1Q8WYR4 309 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 BRD9Q9H8M2 597 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
SYNCRIP-203ENST00000444272 MEIS3P2A8K0S8 358 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 CDX4O14627 284 aaPredicted RBP16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 MAP3K13O43283 966 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 PXNP49023 591 aaPredicted RBP16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 CREB5Q02930 508 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 PLPPR4Q7Z2D5 763 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZNF843Q8N446 348 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 ING5Q8WYH8 240 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 CDHR1Q96JP9 859 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 SLC32A1Q9H598 525 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 CLMPQ9H6B4 373 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 POLIQ9UNA4 740 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 FAN1Q9Y2M0 1017 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 EML5Q05BV3 1969 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 ASCC3Q8N3C0 2202 aaKnown RBP16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 CACNA1EQ15878 2313 aa16.23■□□□□ 0.19
SYNCRIP-203ENST00000444272 H0Y626 953 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 TRIM16O95361 564 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 CAVIN2O95810 425 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 FGFR4P22455 802 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 HOXA6P31267 233 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 GRM2Q14416 872 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 VPS53Q5VIR6 699 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 ZC3H10Q96K80 434 aaKnown RBP16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 JPH1Q9HDC5 661 aaPredicted RBP16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 JADE2Q9NQC1 790 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 ECHDC1Q9NTX5 307 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
SYNCRIP-203ENST00000444272 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 NRP1O14786 923 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 DDHD2O94830 711 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 ALDH2P05091 517 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 RDXP35241 583 aaKnown RBP16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 PHKA2P46019 1235 aa16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
SYNCRIP-203ENST00000444272 SRSF1Q07955 248 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■□□□ 13.7
SYNCRIP-203ENST00000444272 LRRC32Q14392 662 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms