RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 CLCN6P51797 869 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 SARNPP82979 210 aaKnown RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 GIT2Q14161 759 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 RAD9BQ6WBX8 426 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 TRIM7Q9C029 511 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 GPRC5CQ9NQ84 441 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 FHOD1Q9Y613 1164 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 A6NNZ2 444 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 ADM5C9JUS6 153 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 KIAA0391O15091 583 aaKnown RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 PRPSAP2O60256 369 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 PSMA2P25787 234 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MXRA7P84157 204 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 CDO1Q16878 200 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 TUBB8Q3ZCM7 444 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 LGSNQ5TDP6 509 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 PACSIN2Q9UNF0 486 aaPredicted RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 IGSF9BQ9UPX0 1349 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 GOLGA8KD6RF30 607 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 STAMBPO95630 424 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 DSG3P32926 999 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 KCNJ6P48051 423 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 SAMD3Q8N6K7 520 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 ZNF564Q8TBZ8 553 aaPredicted RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 P3H4Q92791 437 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 STK33Q9BYT3 514 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 GTF2A2P52657 109 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 AP3M2P53677 418 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 PSMC6P62333 389 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MRPS9P82933 396 aaKnown RBP9.36□□□□□ -0.91
CCDC113-202ENST00000443128 DR1Q01658 176 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 TTI2Q6NXR4 508 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 FBXO38Q6PIJ6 1188 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MGARPQ8TDB4 240 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 AGPAT1Q99943 283 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MED4Q9NPJ6 270 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 CYP26B1Q9NR63 512 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 AGPAT3Q9NRZ7 376 aa9.36□□□□□ -0.91
CCDC113-202ENST00000443128 MIF4GDA9UHW6 222 aaKnown RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ATP1A1P05023 1023 aaKnown RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 PHBP35232 272 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ATP1A2P50993 1020 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ARPP19P56211 112 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 SLC18A3Q16572 532 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ANKRD42Q8N9B4 389 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 SEMA6BQ9H3T3 888 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ERAP1Q9NZ08 941 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ATP8A1Q9Y2Q0 1164 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 MCF2LO15068 1137 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 AP5Z1O43299 807 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 LPXNO60711 386 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 HUS1O60921 280 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 PGM5Q15124 567 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 TRIP13Q15645 432 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 NGRNQ9NPE2 291 aaKnown RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 LRP6O75581 1613 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 MUTP22033 750 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ALDH3A1P30838 453 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 PNMA5Q96PV4 448 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ERGIC2Q96RQ1 377 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 LTBP4Q8N2S1 1624 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 SSU72P8A0A1W2PR75 194 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 EVI5O60447 810 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 CALB1P05937 261 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 C6orf222P0C671 652 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ZNF18P17022 549 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 NCAPHQ15003 741 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 KCTD16Q68DU8 428 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ACAP3Q96P50 834 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 GLIS2Q9BZE0 524 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 ABCB6Q9NP58 842 aa9.35□□□□□ -0.91
CCDC113-202ENST00000443128 AHDC1Q5TGY3 1603 aaPredicted RBP9.35□□□□□ -0.91
CCDC113-202ENST00000443128 M0QYV0 167 aa9.34□□□□□ -0.91
CCDC113-202ENST00000443128 MAGEB2O15479 319 aa9.34□□□□□ -0.91
CCDC113-202ENST00000443128 BUB1BO60566 1050 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-202ENST00000443128 HOXD10P28358 340 aa9.34□□□□□ -0.91
CCDC113-202ENST00000443128 ARL4AP40617 200 aa9.34□□□□□ -0.91
CCDC113-202ENST00000443128 PPM1FP49593 454 aaPredicted RBP9.34□□□□□ -0.91
CCDC113-202ENST00000443128 TMEM62Q0P6H9 643 aa9.34□□□□□ -0.91
CCDC113-202ENST00000443128 SF3A3Q12874 501 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC113-202ENST00000443128 GABPB2Q8TAK5 448 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms