RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ELAC1Q9H777 363 aaKnown RBP8.46□□□□□ -1.06
SSXP3-201ENST00000442971 KIAA1522Q9P206 1035 aaPredicted RBP8.46□□□□□ -1.06
SSXP3-201ENST00000442971 PLEKHB1Q9UF11 243 aaPredicted RBP8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CELSR1Q9NYQ6 3014 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 PDZD2O15018 2839 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 THADAQ6YHU6 1953 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 MTCL1Q9Y4B5 1905 aaKnown RBP8.45□□□□□ -1.06
SSXP3-201ENST00000442971 BOD1L1Q8NFC6 3051 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 COL4A2P08572 1712 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 PLA2G6O60733 806 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 OPHN1O60890 802 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 VAMP4O75379 141 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 GGPS1O95749 300 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 GLUD1P00367 558 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 CD59P13987 128 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
SSXP3-201ENST00000442971 FAM189BP81408 668 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 FOXK1P85037 733 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 KARSQ15046 597 aaKnown RBP8.45□□□□□ -1.06
SSXP3-201ENST00000442971 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 FAM43BQ6ZT52 329 aaPredicted RBP8.45□□□□□ -1.06
SSXP3-201ENST00000442971 BRD9Q9H8M2 597 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 RNF19AQ9NV58 838 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 ZDHHC7Q9NXF8 308 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 SYNPO2Q9UMS6 1093 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 TRPV2Q9Y5S1 764 aa8.45□□□□□ -1.06
SSXP3-201ENST00000442971 BAZ2AQ9UIF9 1905 aaKnown RBP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 E9PAM4 449 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 SH3BP5O60239 455 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 SSBP05455 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 SPATA31D3P0C874 917 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 HLA-EP13747 358 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 GBP1P32455 592 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 ATXN3P54252 364 aaPredicted RBP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 MAPK6Q16659 721 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 DGKKQ5KSL6 1271 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 ZNF746Q6NUN9 644 aaPredicted RBP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 SPATA31D4Q6ZUB0 917 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 GRASPQ7Z6J2 395 aaPredicted RBP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 TICAM1Q8IUC6 712 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 GALNT15Q8N3T1 639 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 PIGKQ92643 395 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 CHMP4CQ96CF2 233 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 IGSF21Q96ID5 467 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 DNAJC2Q99543 621 aaKnown RBP8.44□□□□□ -1.06
SSXP3-201ENST00000442971 PI4K2AQ9BTU6 479 aa8.44□□□□□ -1.06
SSXP3-201ENST00000442971 ADAMTS9Q9P2N4 1935 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 M0QZ92 97 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 RPLP2P05387 115 aaKnown RBP8.43□□□□□ -1.06
SSXP3-201ENST00000442971 ADH1AP07327 375 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 SLC1A4P43007 532 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 NTHL1P78549 312 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 TMEM62Q0P6H9 643 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 WDR44Q5JSH3 913 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 PMS2CLQ68D20 193 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 CRYBG3Q68DQ2 2970 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 TMED8Q6PL24 325 aaPredicted RBP8.43□□□□□ -1.06
SSXP3-201ENST00000442971 AGMOQ6ZNB7 445 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 FAM26EQ8N5C1 309 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 BCL7CQ8WUZ0 217 aaPredicted RBP8.43□□□□□ -1.06
SSXP3-201ENST00000442971 VN1R3Q9BXE9 311 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 PLEKHA4Q9H4M7 779 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 MRPL17Q9NRX2 175 aaKnown RBP8.43□□□□□ -1.06
SSXP3-201ENST00000442971 TUBE1Q9UJT0 475 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
SSXP3-201ENST00000442971 SVILO95425 2214 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 FAM149AA5PLN7 773 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 EIF3JO75822 258 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 SEMG2Q02383 582 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 PREPLQ4J6C6 727 aaPredicted RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 CCDC158Q5M9N0 1113 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 ARHGAP40Q5TG30 622 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 SYDE2Q5VT97 1194 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 NFXL1Q6ZNB6 911 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 KCTD1Q719H9 257 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 ZC3H18Q86VM9 953 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 TRIM50Q86XT4 487 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 AMOTL1Q8IY63 956 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 NSUN6Q8TEA1 469 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 IRF7Q92985 503 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 GTPBP2Q9BX10 602 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 CELF4Q9BZC1 486 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 FAM49AQ9H0Q0 323 aaPredicted RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 RANBP17Q9H2T7 1088 aaKnown RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 ZNF334Q9HCZ1 680 aaPredicted RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 TRPV5Q9NQA5 729 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 ZNF215Q9UL58 517 aaPredicted RBP8.42□□□□□ -1.06
SSXP3-201ENST00000442971 SLC8A2Q9UPR5 921 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
SSXP3-201ENST00000442971 KNTC1P50748 2209 aa8.41□□□□□ -1.06
SSXP3-201ENST00000442971 IGKV6D-41A0A0C4DH26 115 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms