RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TRPA1O75762 1119 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 AKAP3O75969 853 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 IGHA2P01877 340 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 ZNF286BP0CG31 522 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 GLRA2P23416 452 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 PSMC2P35998 433 aaKnown RBP8.82□□□□□ -1
CCDC39-201ENST00000442201 ZSCAN26Q16670 478 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 MFSD14CQ5VZR4 134 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 TLK2Q86UE8 772 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 DEPTORQ8TB45 409 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 C16orf70Q9BSU1 422 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 MKNK1Q9BUB5 465 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 ARHGAP28Q9P2N2 729 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 IGKV6-21A0A0C4DH24 114 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 LRRIQ4A6NIV6 560 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 A6NJR5 290 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 COQ9O75208 318 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 INSRRP14616 1297 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 CYP2J2P51589 502 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 TRIM14Q14142 442 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 TMEM132AQ24JP5 1023 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 BRDTQ58F21 947 aaPredicted RBP8.82□□□□□ -1
CCDC39-201ENST00000442201 C12orf56Q8IXR9 622 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 ASAP3Q8TDY4 903 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 PSPC1Q8WXF1 523 aaKnown RBP8.82□□□□□ -1
CCDC39-201ENST00000442201 AP5M1Q9H0R1 490 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 DMAC2Q9NW81 257 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 GABRQQ9UN88 632 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 FRMD4BQ9Y2L6 1034 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 FHOD1Q9Y613 1164 aa8.82□□□□□ -1
CCDC39-201ENST00000442201 V9GYY5 206 aaPredicted RBP8.82□□□□□ -1
CCDC39-201ENST00000442201 ADGRA3Q8IWK6 1321 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 EXOC3O60645 756 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 AKR1A1P14550 325 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 CASP4P49662 377 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 VEGFBP49765 207 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 PRKCZQ05513 592 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 BIRC2Q13490 618 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 MXD4Q14582 209 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 TEX35Q5T0J7 233 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 FBXO38Q6PIJ6 1188 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 FAM186BQ8IYM0 893 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 RETREG2Q8NC44 543 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 TRAPPC12Q8WVT3 735 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 PRPF31Q8WWY3 499 aaKnown RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 PCMTD1Q96MG8 357 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 ERGIC2Q96RQ1 377 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 RNF186Q9NXI6 227 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 PYCARDQ9ULZ3 195 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 Q9Y3F1 56 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 AKR1B15C9JRZ8 316 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 MAGEB2O15479 319 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 H2AFXP16104 143 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 CNGA1P29973 690 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 IGBP1P78318 339 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 STRN3Q13033 797 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 MMS22LQ6ZRQ5 1243 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 LRRC71Q8N4P6 559 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 KCNN1Q92952 543 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 COL1A2P08123 1366 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 K7ERI5 159 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 HNRNPDLO14979 420 aaKnown RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 SKILP12757 684 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 CPT1AP50416 773 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 RBL2Q08999 1139 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 DRP2Q13474 957 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 CAPSQ13938 189 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 METTL13Q8N6R0 699 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 NEK11Q8NG66 645 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 TRIB2Q92519 343 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 LENG1Q96BZ8 264 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 BICD1Q96G01 975 aa8.81□□□□□ -1
CCDC39-201ENST00000442201 SUCLA2Q9P2R7 463 aaPredicted RBP8.81□□□□□ -1
CCDC39-201ENST00000442201 TISP43B9A030 160 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 C22orf31O95567 290 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 GYPCP04921 128 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 HOXD10P28358 340 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 PLA2G4AP47712 749 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 TCERG1LQ5VWI1 586 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 EFCAB12Q6NXP0 572 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 CNGA4Q8IV77 575 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 TC2NQ8N9U0 490 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 XXYLT1Q8NBI6 393 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 CCDC112Q8NEF3 446 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 CBWD1Q9BRT8 395 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 NUP58Q9BVL2 599 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 PCIF1Q9H4Z3 704 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 MYH9P35579 1960 aaKnown RBP8.8□□□□□ -1
CCDC39-201ENST00000442201 ADCY3O60266 1144 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 RPS6KA5O75582 802 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 TRIM21P19474 475 aaKnown RBP8.8□□□□□ -1
CCDC39-201ENST00000442201 KLRC1P26715 233 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 CASP14P31944 242 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms