RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 ERLIN2O94905 339 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 CXCL14O95715 111 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 CENPBP07199 599 aaPredicted RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 FGFR1P11362 822 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 YWHABP31946 246 aaKnown RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 PLA2G5P39877 138 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 ITIH3Q06033 890 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 CALCRLQ16602 461 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 XKR9Q5GH70 373 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 HERC4Q5GLZ8 1057 aaPredicted RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 NOMO2Q5JPE7 1267 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 NCAPH2Q6IBW4 605 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 RBM23Q86U06 439 aaKnown RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 ERMNQ8TAM6 284 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 RIPOR3Q96MK2 946 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 NLRP4Q96MN2 994 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 MTRQ99707 1265 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 FAM105AQ9NUU6 356 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 TPCN1Q9ULQ1 816 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 PIN4Q9Y237 131 aaKnown RBP8.67□□□□□ -1.02
CD44-211ENST00000442151 KIF3AQ9Y496 699 aa8.67□□□□□ -1.02
CD44-211ENST00000442151 EDIL3O43854 480 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 DGAT1O75907 488 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 LYPLA2O95372 231 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 MTHFRP42898 656 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 GATMP50440 423 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 NEK4P51957 841 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 AK2P54819 239 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 BCAR1P56945 870 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 CAMK1Q14012 370 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 CLUL1Q15846 466 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 UGCGQ16739 394 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 PLPP4Q5VZY2 271 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 ANKRD54Q6NXT1 300 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 APBB1IPQ7Z5R6 666 aaPredicted RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 ZNF598Q86UK7 904 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 TPH2Q8IWU9 490 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 MRPL43Q8N983 215 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 SMRP1Q8NCR6 262 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 HELQQ8TDG4 1101 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 PRPF31Q8WWY3 499 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 TMEM175Q9BSA9 504 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 DHX33Q9H6R0 707 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 STBD1O95210 358 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 SRGAP2CP0DJJ0 459 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 MUTP22033 750 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 DNAJB1P25685 340 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 CA8P35219 290 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 IRS1P35568 1242 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 TECP42680 631 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 ERVFC1P60507 584 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 HMGN5P82970 282 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 GNL2Q13823 731 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 NOTUMQ6P988 496 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 ANO5Q75V66 913 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 BMP8AQ7Z5Y6 402 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 MRPL10Q7Z7H8 261 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 DDX53Q86TM3 631 aaKnown RBP8.66□□□□□ -1.02
CD44-211ENST00000442151 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 SLC39A11Q8N1S5 342 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 EDAQ92838 391 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 GTF3C6Q969F1 213 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 LXNQ9BS40 222 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 KCNG1Q9UIX4 513 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 VAV3Q9UKW4 847 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 FAN1Q9Y2M0 1017 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
CD44-211ENST00000442151 LOC730098B7Z3J9 87 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 SLC37A4O43826 429 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 NEMFO60524 1076 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 TBX10O75333 385 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 CSPG5O95196 566 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 C1RP00736 705 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 ITGA4P13612 1032 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 LAMTOR4Q0VGL1 99 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 NPY5RQ15761 445 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 ATAT1Q5SQI0 421 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 CYP26C1Q6V0L0 522 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 FERMT3Q86UX7 667 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 FAM184AQ8NB25 1140 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 MCPH1Q8NEM0 835 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 DYDC2Q96IM9 177 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 AIFM3Q96NN9 605 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 NACC1Q96RE7 527 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 CEP89Q96ST8 783 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 EIF2AK1Q9BQI3 630 aaKnown RBP8.65□□□□□ -1.02
CD44-211ENST00000442151 COLEC11Q9BWP8 271 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 ADAM33Q9BZ11 813 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 TRIM6Q9C030 488 aaPredicted RBP8.65□□□□□ -1.02
CD44-211ENST00000442151 C2orf40Q9H1Z8 148 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 TUFT1Q9NNX1 390 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 CD320Q9NPF0 282 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 AGPAT5Q9NUQ2 364 aa8.65□□□□□ -1.02
CD44-211ENST00000442151 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms