RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 FZD8Q9H461 694 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 CHD7Q9P2D1 2997 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 USP25Q9UHP3 1055 aa18.64■□□□□ 0.57
TARDBP-203ENST00000439080 FRMD3A2A2Y4 597 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 C9IYK1 514 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 IDEP14735 1019 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 ARF4P18085 180 aaPredicted RBP18.63■□□□□ 0.57
TARDBP-203ENST00000439080 AXLP30530 894 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 HOXA11P31270 313 aaPredicted RBP18.63■□□□□ 0.57
TARDBP-203ENST00000439080 AFMP43652 599 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 LONRF3Q496Y0 759 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 NPAS4Q8IUM7 802 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 GRAMD1CQ8IYS0 662 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 TMEM161BQ8NDZ6 487 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 TOP1MTQ969P6 601 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
TARDBP-203ENST00000439080 COL4A4P53420 1690 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 K7ERI5 159 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 ACKR2O00590 384 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 TRAK2O60296 914 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 MAPTP10636 758 aaKnown RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 GAP43P17677 238 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 CASP1P29466 404 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 PBX2P40425 430 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 ASIC1P78348 528 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 PRPF4BQ13523 1007 aaKnown RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 TAS1R3Q7RTX0 852 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 NTPCRQ9BSD7 190 aaKnown RBP18.62■□□□□ 0.57
TARDBP-203ENST00000439080 ZBED2Q9BTP6 218 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 TMEM134Q9H6X4 195 aa18.62■□□□□ 0.57
TARDBP-203ENST00000439080 TTLL13PA6NNM8 815 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 H0YCG3 227 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 TLL1O43897 1013 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
TARDBP-203ENST00000439080 DNAJB2P25686 324 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 RAB30Q15771 203 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 TMEM132AQ24JP5 1023 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 CNNM4Q6P4Q7 775 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 CRIPAKQ8N1N5 446 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 PAGE5Q96GU1 130 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 FIZ1Q96SL8 496 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 C7orf25Q9BPX7 421 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 TRAIPQ9BWF2 469 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 BLZF1Q9H2G9 400 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 FAM105AQ9NUU6 356 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 PANK4Q9NVE7 773 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 SEL1LQ9UBV2 794 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 LRFN2Q9ULH4 789 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 USP20Q9Y2K6 914 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 YBX2Q9Y2T7 364 aaKnown RBP18.61■□□□□ 0.57
TARDBP-203ENST00000439080 PCDHA11Q9Y5I1 949 aa18.61■□□□□ 0.57
TARDBP-203ENST00000439080 A0A0U1RQF3 1178 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 ZNF202O95125 648 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 STAG3L1P0CL83 205 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 MYOGP15173 224 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 NMT1P30419 496 aaKnown RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 RAB27AP51159 221 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 FAM160A1Q05DH4 1040 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 STRN3Q13033 797 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 COASYQ13057 564 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 CUL4BQ13620 913 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 UBXN11Q5T124 520 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 KRBA2Q6ZNG9 492 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 HAUS6Q7Z4H7 955 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 CDR2LQ86X02 465 aaPredicted RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 ECHDC2Q86YB7 292 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 CCDC65Q8IXS2 484 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 FMR1NBQ8N0W7 255 aaPredicted RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 CNNM3Q8NE01 707 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 YME1L1Q96TA2 773 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 MRPL4Q9BYD3 311 aaKnown RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 PDZD7Q9H5P4 517 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 RC3H2Q9HBD1 1191 aaKnown RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 TMEM161AQ9NX61 479 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
TARDBP-203ENST00000439080 TDRD15B5MCY1 1934 aaKnown RBP18.6■□□□□ 0.57
TARDBP-203ENST00000439080 A0A1B0GUA9 196 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 N4BP3O15049 544 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 ATF7P17544 494 aaPredicted RBP18.59■□□□□ 0.57
TARDBP-203ENST00000439080 FAM189BP81408 668 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 HTRA4P83105 476 aaPredicted RBP18.59■□□□□ 0.57
TARDBP-203ENST00000439080 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
TARDBP-203ENST00000439080 NT5DC1Q5TFE4 455 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 SLC27A1Q6PCB7 646 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 CLEC17AQ6ZS10 378 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 RNF169Q8NCN4 708 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 SLC17A8Q8NDX2 589 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 KCNN1Q92952 543 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 RAD9AQ99638 391 aa18.59■□□□□ 0.57
TARDBP-203ENST00000439080 EIF2AQ9BY44 585 aaKnown RBP18.59■□□□□ 0.57
TARDBP-203ENST00000439080 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
TARDBP-203ENST00000439080 MRPL44Q9H9J2 332 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms