RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 TRIM49P0CI25 452 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 TRIM49CP0CI26 452 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PLS3P13797 630 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PSMC2P35998 433 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 CACNA2D1P54289 1103 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 MYL7Q01449 175 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 ICA1Q05084 483 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 OVGP1Q12889 678 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 MKRN3Q13064 507 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 BLMHQ13867 455 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 USH1GQ495M9 461 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 C1orf146Q5VVC0 180 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 FAM178BQ8IXR5 827 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PALM2Q8IXS6 379 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PIAS4Q8N2W9 510 aaPredicted RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 MAB21L3Q8N8X9 362 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 ZNF570Q96NI8 536 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PCIF1Q9H4Z3 704 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 SH3GLB2Q9NR46 395 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CTNNAL1Q9UBT7 734 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 ANGPTL2Q9UKU9 493 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 POTEFA5A3E0 1075 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 MIF4GDA9UHW6 222 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 ERVV-2B6SEH9 535 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 GOLGA8SH3BPF8 625 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 GOLGA8MH3BSY2 632 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CLDN3O15551 220 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PHF2O75151 1096 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 NR3C1P04150 777 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 POTEIP0CG38 1075 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 SLC16A2P36021 539 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 MECOMQ03112 1051 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PSMD6Q15008 389 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 SNX30Q5VWJ9 437 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 AADACL2Q6P093 401 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 POTEGQ6S5H5 508 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 POTEEQ6S8J3 1075 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 DGKHQ86XP1 1220 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 STK32AQ8WU08 396 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CCDC124Q96CT7 223 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 PGM2Q96G03 612 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 ACSBG1Q96GR2 724 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 DDX50Q9BQ39 737 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 BRIP1Q9BX63 1249 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 TRIM55Q9BYV6 548 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 BHMT2Q9H2M3 363 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CDC42EP4Q9H3Q1 356 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 SMYD3Q9H7B4 428 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PPARGC1AQ9UBK2 798 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 KDM6AO15550 1401 aaPredicted RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 FAM47DPA6NHR8 397 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 FOXO6A8MYZ6 492 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 NKRFO15226 690 aaKnown RBP eCLIP6.58□□□□□ -1.36
BDNF-210ENST00000438929 ATMINO43313 823 aaPredicted RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 SERPINB3P29508 390 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 MAPK4P31152 587 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PGM1P36871 562 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PTDSS1P48651 473 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 RPS6KA3P51812 740 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 RIPK1Q13546 671 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CNGA2Q16280 664 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 SYN2Q92777 582 aaPredicted RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 CARD9Q9H257 536 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 DCLRE1BQ9H816 532 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 NDE1Q9NXR1 346 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 ADAM22Q9P0K1 906 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 PHTF1Q9UMS5 762 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 AGTPBP1Q9UPW5 1226 aa6.58□□□□□ -1.36
BDNF-210ENST00000438929 DIS3Q9Y2L1 958 aaKnown RBP6.58□□□□□ -1.36
BDNF-210ENST00000438929 PXDNQ92626 1479 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 SMNDC1O75940 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
BDNF-210ENST00000438929 RARGP13631 454 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 RXRBP28702 533 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 HNRNPH3P31942 346 aaKnown RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 RPL21P46778 160 aaKnown RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 ARFIP2P53365 341 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 EPHB1P54762 984 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 SH3BGRP55822 239 aaPredicted RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 KDSRQ06136 332 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 THOC5Q13769 683 aaKnown RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 ZNF268Q14587 947 aaPredicted RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 FITM2Q8N6M3 262 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 KLF6Q99612 283 aaPredicted RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 MOV10L1Q9BXT6 1211 aaKnown RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 THAP2Q9H0W7 228 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 EBF2Q9HAK2 575 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 CCDC87Q9NVE4 849 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 DDX39AO00148 427 aaKnown RBP6.57□□□□□ -1.36
BDNF-210ENST00000438929 O00370 1275 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 RIPK2O43353 540 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 KITP10721 976 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 STAT3P40763 770 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 PEX5P50542 639 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 PTENP60484 403 aa6.57□□□□□ -1.36
BDNF-210ENST00000438929 GSTO1P78417 241 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms