RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 OFD1O75665 1012 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 ITGB1P05556 798 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 PLA2G4BP0C869 781 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 MARCKSP29966 332 aaPredicted RBP19.68■□□□□ 0.74
NCSTN-208ENST00000438008 NASPP49321 788 aaPredicted RBP19.68■□□□□ 0.74
NCSTN-208ENST00000438008 EFNA5P52803 228 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 MAPK7Q13164 816 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 TIGD5Q53EQ6 642 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 GLB1LQ6UWU2 654 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 AGMOQ6ZNB7 445 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 COLGALT1Q8NBJ5 622 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 SMG8Q8ND04 991 aaKnown RBP19.68■□□□□ 0.74
NCSTN-208ENST00000438008 DRC1Q96MC2 740 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 C17orf75Q9HAS0 396 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 POLD4Q9HCU8 107 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 ALG13Q9NP73 1137 aaKnown RBP19.68■□□□□ 0.74
NCSTN-208ENST00000438008 PRDM6Q9NQX0 595 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 HCSTQ9UBK5 93 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 DAXXQ9UER7 740 aaPredicted RBP19.68■□□□□ 0.74
NCSTN-208ENST00000438008 CNTNAP2Q9UHC6 1331 aa19.68■□□□□ 0.74
NCSTN-208ENST00000438008 MEIS3P2A8K0S8 358 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 ZSCAN22P10073 491 aaPredicted RBP19.67■□□□□ 0.74
NCSTN-208ENST00000438008 CEBPZQ03701 1054 aaKnown RBP19.67■□□□□ 0.74
NCSTN-208ENST00000438008 UBE3AQ05086 875 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 CAMK1Q14012 370 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 MAPK6Q16659 721 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 EIF2AQ9BY44 585 aaKnown RBP19.67■□□□□ 0.74
NCSTN-208ENST00000438008 UBN1Q9NPG3 1134 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 THEGQ9P2T0 379 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 IPPQ9Y573 584 aa19.67■□□□□ 0.74
NCSTN-208ENST00000438008 ACKR2O00590 384 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 SSBP05455 408 aaKnown RBP eCLIP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 NPTX2P47972 431 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 LONRF3Q496Y0 759 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 NOMO2Q5JPE7 1267 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 LRRC15Q8TF66 581 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 ATXN2LQ8WWM7 1075 aaKnown RBP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 ZNF396Q96N95 335 aaPredicted RBP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 NTPCRQ9BSD7 190 aaKnown RBP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 NSUN3Q9H649 340 aaKnown RBP19.66■□□□□ 0.74
NCSTN-208ENST00000438008 RSAD1Q9HA92 442 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 BLOC1S4Q9NUP1 217 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 KCNG1Q9UIX4 513 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 COG5Q9UP83 839 aa19.66■□□□□ 0.74
NCSTN-208ENST00000438008 CARNS1A5YM72 827 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 INPPL1O15357 1258 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 FGF18O76093 207 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PRKCBP05771 671 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 ITGA4P13612 1032 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PLCG1P19174 1290 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 DNAJB1P25685 340 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PEX3P56589 373 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 DMP1Q13316 513 aaPredicted RBP19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PRPF4BQ13523 1007 aaKnown RBP19.65■□□□□ 0.74
NCSTN-208ENST00000438008 SKIV2LQ15477 1246 aaKnown RBP19.65■□□□□ 0.74
NCSTN-208ENST00000438008 ARSHQ5FYA8 562 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 KCNT2Q6UVM3 1135 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 USP49Q70CQ1 688 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 KRI1Q8N9T8 703 aaKnown RBP19.65■□□□□ 0.74
NCSTN-208ENST00000438008 LINC00301Q8NCQ3 95 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 POF1BQ8WVV4 589 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 EPSTI1Q96J88 318 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 ZNF558Q96NG5 402 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 CLIC6Q96NY7 704 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 KIFC3Q9BVG8 833 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 TMEM134Q9H6X4 195 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 TBC1D13Q9NVG8 400 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 ARHGAP28Q9P2N2 729 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 LZTS1Q9Y250 596 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 RBM19Q9Y4C8 960 aaKnown RBP19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PHLPP2Q6ZVD8 1323 aa19.65■□□□□ 0.74
NCSTN-208ENST00000438008 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 CCDC169A6NNP5 214 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 N4BP3O15049 544 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 F13A1P00488 732 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 PPM1AP35813 382 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 THNSL1Q8IYQ7 743 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 HACE1Q8IYU2 909 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 URGCPQ8TCY9 931 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 SPIRE2Q8WWL2 714 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 RAD54LQ92698 747 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 SYMPKQ92797 1274 aaKnown RBP19.64■□□□□ 0.73
NCSTN-208ENST00000438008 TRIM6Q9C030 488 aaPredicted RBP19.64■□□□□ 0.73
NCSTN-208ENST00000438008 KANSL3Q9P2N6 904 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 CCDC39Q9UFE4 941 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 GIT1Q9Y2X7 761 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 KIAA1671Q9BY89 1806 aa19.64■□□□□ 0.73
NCSTN-208ENST00000438008 TTLL13PA6NNM8 815 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 K7ERI5 159 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 PPP6R2O75170 966 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 NPTXRO95502 500 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 YEATS4O95619 227 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 PLS3P13797 630 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 DDIT3P35638 169 aa19.63■□□□□ 0.73
NCSTN-208ENST00000438008 PKP1Q13835 747 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms