RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 BICD1Q96G01 975 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 NIFKQ9BYG3 293 aaKnown RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 UBE2TQ9NPD8 197 aaPredicted RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 H0YCG3 227 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 CYP2C8P10632 490 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 TCF7P36402 384 aaPredicted RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 MMS19Q96T76 1030 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 MROH8Q9H579 483 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 DHX33Q9H6R0 707 aaKnown RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 ARHGAP28Q9P2N2 729 aa13.48□□□□□ -0.25
LINC00242-201ENST00000437615 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
LINC00242-201ENST00000437615 KIAA1217Q5T5P2 1943 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 MAP1SQ66K74 1059 aaPredicted RBP13.47□□□□□ -0.25
LINC00242-201ENST00000437615 FGD4Q96M96 766 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 POP1Q99575 1024 aaKnown RBP13.47□□□□□ -0.25
LINC00242-201ENST00000437615 GPR88Q9GZN0 384 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 PORCNQ9H237 461 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 SNX12Q9UMY4 172 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 PTPRFP10586 1907 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 OTOFQ9HC10 1997 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 DNAJC25-GNG10A0A024R161 153 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
LINC00242-201ENST00000437615 ARIH2O95376 493 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 ANXA13P27216 316 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 MXI1P50539 228 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
LINC00242-201ENST00000437615 EPC2Q52LR7 807 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 TAS1R3Q7RTX0 852 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 PARD3BQ8TEW8 1205 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 AZI2Q9H6S1 392 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 ZNF446Q9NWS9 450 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
LINC00242-201ENST00000437615 DDX3XO00571 662 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00242-201ENST00000437615 PALMO75781 387 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 RHOXF2BP0C7M4 288 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 PRLRP16471 622 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 RFX1P22670 979 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 GLRA2P23416 452 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 ABCD1P33897 745 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 ARL2P36404 184 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
LINC00242-201ENST00000437615 STRN3Q13033 797 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 KCNV1Q6PIU1 500 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 TMCO3Q6UWJ1 677 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.25
LINC00242-201ENST00000437615 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 NOA1Q8NC60 698 aaKnown RBP13.46□□□□□ -0.25
LINC00242-201ENST00000437615 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 CAGE1Q8TC20 777 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 GLG1Q92896 1179 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 RHOXF2Q9BQY4 288 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 ANKZF1Q9H8Y5 726 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 EFCC1Q9HA90 598 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
LINC00242-201ENST00000437615 PAPPA2Q9BXP8 1791 aa13.46□□□□□ -0.26
LINC00242-201ENST00000437615 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 K7ERI5 159 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 NCK2O43639 380 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 GARTP22102 1010 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 LIG4P49917 911 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 MCCD1P59942 119 aaPredicted RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 CKAP4Q07065 602 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 KRT39Q6A163 491 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 ARHGEF19Q8IW93 802 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 GPD1LQ8N335 351 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 AFAP1L1Q8TED9 768 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 PSMB7Q99436 277 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 FAM213AQ9BRX8 229 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 PNMA3Q9UL41 463 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 PMM2O15305 246 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 RFC5P40937 340 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 NAMPTP43490 491 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 CELF3Q5SZQ8 465 aaKnown RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 FBXO16Q8IX29 292 aaPredicted RBP13.45□□□□□ -0.26
LINC00242-201ENST00000437615 GPR20Q99678 358 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 LCTP09848 1927 aa13.45□□□□□ -0.26
LINC00242-201ENST00000437615 GRIN3BO60391 1043 aa13.44□□□□□ -0.26
LINC00242-201ENST00000437615 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
LINC00242-201ENST00000437615 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
LINC00242-201ENST00000437615 TCP1P17987 556 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms