RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 CTDNEP1O95476 244 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 NEFLP07196 543 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 DNM2P50570 870 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 PPP2R5CQ13362 524 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDR1-237ENST00000437124 PPP4R3AQ6IN85 833 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 NEK8Q86SG6 692 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
DDR1-237ENST00000437124 CABP7Q86V35 215 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 SIX5Q8N196 739 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 HELQQ8TDG4 1101 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 FAM20AQ96MK3 541 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 CHST12Q9NRB3 414 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 WNT16Q9UBV4 365 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 FBXL21Q9UKT6 434 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
DDR1-237ENST00000437124 OTOGLQ3ZCN5 2332 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 A0A087WZ62 844 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 MAFO75444 373 aaPredicted RBP16.87■□□□□ 0.29
DDR1-237ENST00000437124 GCFC2P16383 781 aaKnown RBP16.87■□□□□ 0.29
DDR1-237ENST00000437124 XBP1P17861 261 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 CA8P35219 290 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 ANAPC15P60006 121 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 ZNF410Q86VK4 478 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 RNF169Q8NCN4 708 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 KCNG4Q8TDN1 519 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 OXER1Q8TDS5 423 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 FDXACB1Q9BRP7 624 aaPredicted RBP16.87■□□□□ 0.29
DDR1-237ENST00000437124 DACT1Q9NYF0 836 aa16.87■□□□□ 0.29
DDR1-237ENST00000437124 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
DDR1-237ENST00000437124 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 QARSP47897 775 aaKnown RBP16.86■□□□□ 0.29
DDR1-237ENST00000437124 AK2P54819 239 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 ANKRD1Q15327 319 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 PLA2G4FQ68DD2 849 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
DDR1-237ENST00000437124 RHPN2Q8IUC4 686 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 HAS1Q92839 578 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 IGSF21Q96ID5 467 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 TRAIPQ9BWF2 469 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 DLL3Q9NYJ7 618 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
DDR1-237ENST00000437124 TBX3O15119 743 aa16.85■□□□□ 0.29
DDR1-237ENST00000437124 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 SFPQP23246 707 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-237ENST00000437124 NPEPPSP55786 919 aa16.85■□□□□ 0.29
DDR1-237ENST00000437124 EARS2Q5JPH6 523 aaKnown RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 KSR1Q8IVT5 923 aa16.85■□□□□ 0.29
DDR1-237ENST00000437124 KIAA2013Q8IYS2 634 aa16.85■□□□□ 0.29
DDR1-237ENST00000437124 FEZF2Q8TBJ5 459 aa16.85■□□□□ 0.29
DDR1-237ENST00000437124 NAP1L4Q99733 375 aaKnown RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 JPH2Q9BR39 696 aaPredicted RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 INO80BQ9C086 356 aaPredicted RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 WRAP73Q9P2S5 460 aaPredicted RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 ORC3Q9UBD5 711 aaPredicted RBP16.85■□□□□ 0.29
DDR1-237ENST00000437124 DKC1O60832 514 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDR1-237ENST00000437124 ZC3H11AO75152 810 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDR1-237ENST00000437124 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
DDR1-237ENST00000437124 FDPSP14324 419 aaKnown RBP16.84■□□□□ 0.29
DDR1-237ENST00000437124 PHKA2P46019 1235 aa16.84■□□□□ 0.29
DDR1-237ENST00000437124 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
DDR1-237ENST00000437124 ZC3H14Q6PJT7 736 aaKnown RBP16.84■□□□□ 0.29
DDR1-237ENST00000437124 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
DDR1-237ENST00000437124 WASF1Q92558 559 aa16.84■□□□□ 0.29
DDR1-237ENST00000437124 RHOBTB2Q9BYZ6 727 aa16.84■□□□□ 0.29
DDR1-237ENST00000437124 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
DDR1-237ENST00000437124 KRBA1A5PL33 1030 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 FAM205CA6NFA0 338 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 GALTP07902 379 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 CLCN4P51793 760 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 EPHA7Q15375 998 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 CYP26C1Q6V0L0 522 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 C4orf19Q8IY42 314 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 NECAB1Q8N987 351 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
DDR1-237ENST00000437124 RUBCNQ92622 972 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 TNFRSF25Q93038 417 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 NXPE3Q969Y0 559 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 CEP170P1Q96L14 293 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 NLRP4Q96MN2 994 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 DHX33Q9H6R0 707 aaKnown RBP16.83■□□□□ 0.28
DDR1-237ENST00000437124 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 PIN4Q9Y237 131 aaKnown RBP16.83■□□□□ 0.28
DDR1-237ENST00000437124 PPME1Q9Y570 386 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 R4GN57 208 aa16.83■□□□□ 0.28
DDR1-237ENST00000437124 ACACBO00763 2458 aa16.82■□□□□ 0.28
DDR1-237ENST00000437124 NARSO43776 548 aaKnown RBP16.82■□□□□ 0.28
DDR1-237ENST00000437124 SKIP12755 728 aa16.82■□□□□ 0.28
DDR1-237ENST00000437124 SPIRE1Q08AE8 756 aa16.82■□□□□ 0.28
DDR1-237ENST00000437124 NR5A1Q13285 461 aa16.82■□□□□ 0.28
DDR1-237ENST00000437124 ME3Q16798 604 aa16.82■□□□□ 0.28
DDR1-237ENST00000437124 TWF2Q6IBS0 349 aaKnown RBP16.82■□□□□ 0.28
DDR1-237ENST00000437124 PHLDB3Q6NSJ2 640 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms