RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 HSPA4LO95757 839 aa16.89■□□□□ 0.29
PTPN13-204ENST00000436978 TTC19Q6DKK2 380 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-204ENST00000436978 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 ROR1Q01973 937 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 ZKSCAN8Q15776 578 aaPredicted RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TNIP3Q96KP6 325 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TEX12Q9BXU0 123 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 EDEM3Q9BZQ6 932 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 PPP1R12AO14974 1030 aaPredicted RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 CCT5P48643 541 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 ESRRGP62508 458 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TRIM45Q9H8W5 580 aaPredicted RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 SAYSD1Q9NPB0 183 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 COPEO14579 308 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 PDIA5Q14554 519 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 AGO2Q9UKV8 859 aaKnown RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 E5RI56 91 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 ACSL3O95573 720 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 CDKL3Q8IVW4 592 aaPredicted RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TEX2Q8IWB9 1127 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 SNX19Q92543 992 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TSSK1BQ9BXA7 367 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 HACD3Q9P035 362 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 CREB3O43889 395 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 SMIM24O75264 130 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 TBCCQ15814 346 aa16.88■□□□□ 0.29
PTPN13-204ENST00000436978 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
PTPN13-204ENST00000436978 H3BRJ5 948 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 ZMYND10O75800 440 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 SCP2P22307 547 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 RASSF3Q86WH2 238 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 LRRC53A6NM62 1247 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 COPS2P61201 443 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 COG2Q14746 738 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 KIF12Q96FN5 646 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 FOXP2O15409 715 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 GUF1Q8N442 669 aaKnown RBP16.87■□□□□ 0.29
PTPN13-204ENST00000436978 PDCD7Q8N8D1 485 aaKnown RBP16.87■□□□□ 0.29
PTPN13-204ENST00000436978 ACTR5Q9H9F9 607 aaPredicted RBP16.87■□□□□ 0.29
PTPN13-204ENST00000436978 EYA4O95677 639 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 TAF11Q15544 211 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 SLC44A5Q8NCS7 719 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 HEY1Q9Y5J3 304 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 MYCP01106 439 aaPredicted RBP16.87■□□□□ 0.29
PTPN13-204ENST00000436978 NFIXQ14938 502 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 FLT1P17948 1338 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 NEMP1O14524 444 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 KCNB1Q14721 858 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 PPP1R2P1Q96PQ5 205 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 BNIP3LO60238 219 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 CYP27A1Q02318 531 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 AP1B1Q10567 949 aa16.87■□□□□ 0.29
PTPN13-204ENST00000436978 CEP55Q53EZ4 464 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 INTS2Q9H0H0 1204 aaKnown RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 ANO9A1A5B4 782 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 TSGA10IPQ3SY00 556 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 ZNF280CQ8ND82 737 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 PPP2R3CQ969Q6 453 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 SLC7A5Q01650 507 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 RAB42Q8N4Z0 105 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 EHD2Q9NZN4 543 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 A0A087WUV0 522 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 DACT3Q96B18 629 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 USP42Q9H9J4 1324 aaKnown RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 E9PMD0 336 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 APOL1O14791 398 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 SLCO1A2P46721 670 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 ARHGDIAP52565 204 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 HACL1Q9UJ83 578 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 EPHA7Q15375 998 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 EPM2AIP1Q7L775 607 aaPredicted RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 LDHDQ86WU2 507 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 SMARCAD1Q9H4L7 1026 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 ATP5HO75947 161 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 CHRNA3P32297 505 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 NSUN2Q08J23 767 aaKnown RBP eCLIP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 ZNF394Q53GI3 561 aa16.86■□□□□ 0.29
PTPN13-204ENST00000436978 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
PTPN13-204ENST00000436978 SPECC1L-ADORA2AF8WAN1 911 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 IMPG1Q17R60 797 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 C12orf60Q5U649 245 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 RHOT1Q8IXI2 618 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 TEX13BQ9BXU2 312 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 AGLP35573 1532 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
PTPN13-204ENST00000436978 GFPT1Q06210 699 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms