RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 RAB27AP51159 221 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
HDAC8-213ENST00000436675 CDC42EP1Q00587 391 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 SLC44A3Q8N4M1 653 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 SLC5A5Q92911 643 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 CEP89Q96ST8 783 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 RIT2Q99578 217 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 NIFKQ9BYG3 293 aaKnown RBP16.64■□□□□ 0.25
HDAC8-213ENST00000436675 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
HDAC8-213ENST00000436675 TPRP12270 2363 aaKnown RBP16.63■□□□□ 0.25
HDAC8-213ENST00000436675 MTCL1Q9Y4B5 1905 aaKnown RBP16.63■□□□□ 0.25
HDAC8-213ENST00000436675 DNAH14Q0VDD8 3507 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 NRP1O14786 923 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 STBD1O95210 358 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 URODP06132 367 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 XKR3Q5GH77 459 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 PLA2G4FQ68DD2 849 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 ZNF410Q86VK4 478 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 RSPH1Q8WYR4 309 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
HDAC8-213ENST00000436675 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 WDR6Q9NNW5 1121 aaKnown RBP16.63■□□□□ 0.25
HDAC8-213ENST00000436675 FANCMQ8IYD8 2048 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 CLUHO75153 1309 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 EPG5Q9HCE0 2579 aa16.63■□□□□ 0.25
HDAC8-213ENST00000436675 GPR179Q6PRD1 2367 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 IGKV6-21A0A0C4DH24 114 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 TEX28O15482 410 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
HDAC8-213ENST00000436675 ADH1AP07327 375 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
HDAC8-213ENST00000436675 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
HDAC8-213ENST00000436675 BICD2Q8TD16 824 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 RPS6KC1Q96S38 1066 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 PIDD1Q9HB75 910 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 VPS54Q9P1Q0 977 aa16.62■□□□□ 0.25
HDAC8-213ENST00000436675 TDRD15B5MCY1 1934 aaKnown RBP16.61■□□□□ 0.25
HDAC8-213ENST00000436675 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 MAFO75444 373 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-213ENST00000436675 PSMD10O75832 226 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 GLUD1P00367 558 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 SOD2P04179 222 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 SRFP11831 508 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 OR1G1P47890 313 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 PALB2Q86YC2 1186 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 GLYCTKQ8IVS8 523 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-213ENST00000436675 STAMQ92783 540 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
HDAC8-213ENST00000436675 AGPAT5Q9NUQ2 364 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 MARCH5Q9NX47 278 aa16.61■□□□□ 0.25
HDAC8-213ENST00000436675 F8W810 466 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 TDP2O95551 362 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 SP9P0CG40 484 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 SRGAP2CP0DJJ0 459 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 GLUD2P49448 558 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 USP11P51784 963 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 NPEPPSP55786 919 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 Q6ZUG5 572 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 ANO5Q75V66 913 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 GET4Q7L5D6 327 aaPredicted RBP16.6■□□□□ 0.25
HDAC8-213ENST00000436675 MRPL10Q7Z7H8 261 aaKnown RBP16.6■□□□□ 0.25
HDAC8-213ENST00000436675 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 BRF1Q92994 677 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 B3GALT6Q96L58 329 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 SLC26A6Q9BXS9 759 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 FOXQ1Q9C009 403 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 MINDY3Q9H8M7 445 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 IFT122Q9HBG6 1241 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 KANSL3Q9P2N6 904 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 EPS15L1Q9UBC2 864 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 STK39Q9UEW8 545 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 SIT1Q9Y3P8 196 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 COL4A3BPQ9Y5P4 624 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
HDAC8-213ENST00000436675 MYH15Q9Y2K3 1946 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 POTEMA6NI47 508 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 LRRN2O75325 713 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 RCAN1P53805 252 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 NLRP5P59047 1200 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 POTEGQ6S5H5 508 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
HDAC8-213ENST00000436675 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 RDM1Q8NG50 284 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 TMEM143Q96AN5 459 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
HDAC8-213ENST00000436675 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
HDAC8-213ENST00000436675 LAMP2P13473 410 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 ITGA4P13612 1032 aa16.58■□□□□ 0.24
HDAC8-213ENST00000436675 HOXA11P31270 313 aaPredicted RBP16.58■□□□□ 0.24
HDAC8-213ENST00000436675 KRT32Q14532 448 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms