RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
CPSF6-202ENST00000435070 RBM46Q8TBY0 533 aaKnown RBP7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SNX29Q8TEQ0 813 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SEC14L1Q92503 715 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 UBN1Q9NPG3 1134 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 BLOC1S4Q9NUP1 217 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 AIPL1Q9NZN9 384 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SLAIN2Q9P270 581 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 PHTF1Q9UMS5 762 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 MYH4Q9Y623 1939 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 DISP2A7MBM2 1401 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SUPT3HO75486 399 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 GSTA2P09210 222 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 MTDHQ86UE4 582 aaKnown RBP7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SYCE1Q8N0S2 351 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 C9orf72Q96LT7 481 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 SEC63Q9UGP8 760 aaKnown RBP7.99□□□□□ -1.13
CPSF6-202ENST00000435070 PHF24Q9UPV7 400 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 BCS1LQ9Y276 419 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 NRXN3Q9Y4C0 1643 aa7.99□□□□□ -1.13
CPSF6-202ENST00000435070 BAG3O95817 575 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 OATP04181 439 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 GNAT2P19087 354 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 FAM26FQ5R3K3 315 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 DTNBP1Q96EV8 351 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 NPHS2Q9NP85 383 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 USP40Q9NVE5 1235 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 AJAP1Q9UKB5 411 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 CES2O00748 559 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 THAP12O43422 761 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ZNF189O75820 626 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 LYNP07948 512 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SERPINB3P29508 390 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 GRB10Q13322 594 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 PPP2R5CQ13362 524 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 CCDC152Q4G0S7 254 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RNF43Q68DV7 783 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RIBC1Q8N443 379 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 PRELID2Q8N945 189 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 CTNNBL1Q8WYA6 563 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ALG13Q9NP73 1137 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 TRMT112Q9UI30 125 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ZFP69BQ9UJL9 534 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 NEO1Q92859 1461 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 CHKAP35790 457 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 NAPAP54920 295 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ZBTB16Q05516 673 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ARHGEF18Q6ZSZ5 1173 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 C4orf33Q8N1A6 199 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 FBXO41Q8TF61 875 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 PTPRN2Q92932 1015 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ARHGEF26Q96DR7 871 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 HES6Q96HZ4 224 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SMC6Q96SB8 1091 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 TAOK3Q9H2K8 898 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 BMP2KQ9NSY1 1161 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 USP20Q9Y2K6 914 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RASA4BC9J798 803 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 BHMG1C9JSJ3 638 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 E7ENQ6 273 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RASA4O43374 803 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RARGP13631 454 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 THOC5Q13769 683 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 C4orf50Q6ZRC1 276 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 WDR60Q8WVS4 1066 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SYN2Q92777 582 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 MIPEPQ99797 713 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 GANQ9H2C0 597 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 FAM187AA6NFU0 413 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 OR6B1O95007 311 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 IL9RQ01113 521 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 RRP1BQ14684 758 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 MESDQ14696 234 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 Q4G0T1 1027 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 CPNE8Q86YQ8 564 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SPATA16Q9BXB7 569 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 DDX18Q9NVP1 670 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 STX8Q9UNK0 236 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 STXBP5LQ9Y2K9 1186 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ZNF711Q9Y462 761 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 PITPNM2Q9BZ72 1349 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 POC1B-GALNT4F8VUJ3 575 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 GYG2O15488 501 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SLC5A1P13866 664 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 SKIV2L2P42285 1042 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 STRN3Q13033 797 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 PABPC1LQ4VXU2 614 aaKnown RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 WASHC2DQ5SRD0 308 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 EPM2AIP1Q7L775 607 aaPredicted RBP7.98□□□□□ -1.13
CPSF6-202ENST00000435070 LCA5Q86VQ0 697 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 C1orf54Q8WWF1 131 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 HDAC9Q9UKV0 1011 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 JAG2Q9Y219 1238 aa7.98□□□□□ -1.13
CPSF6-202ENST00000435070 ZBTB48P10074 688 aaPredicted RBP7.97□□□□□ -1.13
CPSF6-202ENST00000435070 CETPP11597 493 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 NR2F2P24468 414 aa7.97□□□□□ -1.13
CPSF6-202ENST00000435070 RCAN1P53805 252 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms