RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 DGAT1O75907 488 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 CAPN2P17655 700 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 STAT5BP51692 787 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 CDK17Q00537 523 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 GPC2Q8N158 579 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 GPRASP2Q96D09 838 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 TARS2Q9BW92 718 aaKnown RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 GANQ9H2C0 597 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 RBM12Q9NTZ6 932 aaKnown RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 CYP39A1Q9NYL5 469 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 FAN1Q9Y2M0 1017 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 SPDYE16A6NNV3 312 aaPredicted RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 IFFO1Q0D2I5 559 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 EMC2Q15006 297 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
CLDN4-203ENST00000435050 SLC30A5Q8TAD4 765 aa13.15□□□□□ -0.3
CLDN4-203ENST00000435050 PLA2G6O60733 806 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 SCARA5Q6ZMJ2 495 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC25Q86WR0 208 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 MKNK1Q9BUB5 465 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 DDX47Q9H0S4 455 aaKnown RBP13.14□□□□□ -0.31
CLDN4-203ENST00000435050 CYP26B1Q9NR63 512 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 ANKRD31Q8N7Z5 1873 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 PPP3CAQ08209 521 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 NAB2Q15742 525 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 KRT39Q6A163 491 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 OSGEPQ9NPF4 335 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 NFU1Q9UMS0 254 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 CALCAP01258 141 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 C2CD6Q53TS8 623 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 ANO5Q75V66 913 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
CLDN4-203ENST00000435050 CCDC113Q9H0I3 377 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 SYNCQ9H7C4 482 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
CLDN4-203ENST00000435050 OSBPP22059 807 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 DAW1Q8N136 415 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 F8VZ95 297 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 DHX38Q92620 1227 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 DMGDHQ9UI17 866 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 AJAP1Q9UKB5 411 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 FZD9O00144 591 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SASH3O75995 380 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SLC35G2Q8TBE7 412 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 NXF1Q9UBU9 619 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 SMCHD1A6NHR9 2005 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 FGGP02679 453 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 PLA2G4AP47712 749 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 HIRAP54198 1017 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-203ENST00000435050 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 GPD1LQ8N335 351 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 MMP19Q99542 508 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 AIPL1Q9NZN9 384 aa13.13□□□□□ -0.31
CLDN4-203ENST00000435050 MYH7BA7E2Y1 1941 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 TLDC2A0PJX2 215 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 PGRMC1O00264 195 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 CLDN3O15551 220 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 CSDE1O75534 798 aaKnown RBP13.12□□□□□ -0.31
CLDN4-203ENST00000435050 VPS41P49754 854 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 PAK2Q13177 524 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 KCTD16Q68DU8 428 aa13.12□□□□□ -0.31
CLDN4-203ENST00000435050 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms