RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 DEF6Q9H4E7 631 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 VCPKMTQ9H867 229 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 MMRN2Q9H8L6 949 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 FAM207AQ9NSI2 230 aaPredicted RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 PUF60Q9UHX1 559 aaKnown RBP8.14□□□□□ -1.11
COL17A1-204ENST00000433822 FEM1BQ9UK73 627 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 PRR12Q9ULL5 1215 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 PCDHGC5Q9Y5F6 944 aa8.14□□□□□ -1.11
COL17A1-204ENST00000433822 MYH10P35580 1976 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ZNF536O15090 1300 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 FAM86B1E9PN63 330 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 GCOM1H8Y6P7 765 aaPredicted RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 EPHB6O15197 1021 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 MAPK13O15264 365 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 PMM2O15305 246 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 PPP1R12BO60237 982 aaPredicted RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 TBCAO75347 108 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 AFPP02771 609 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 FAM86B2P0C5J1 330 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 POLR2MP0CAP2 368 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 EPB41P11171 864 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 NR2F2P24468 414 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 KLK7P49862 253 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 RBM5P52756 815 aaKnown RBP eCLIP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 VSNL1P62760 191 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ENPEPQ07075 957 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 TCP10Q12799 353 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ADAM9Q13443 819 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 PPP2R5AQ15172 486 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 EPHA7Q15375 998 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 NAB2Q15742 525 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 PRR16Q569H4 304 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 DPY19L2P1Q6NXN4 242 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 CREG2Q8IUH2 290 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 SLC9A9Q8IVB4 645 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 C12orf56Q8IXR9 622 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 HPS3Q969F9 1004 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ZBED3Q96IU2 234 aaPredicted RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 P2RX7Q99572 595 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ARID3AQ99856 593 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 EIF2AK1Q9BQI3 630 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 TDRD3Q9H7E2 651 aaKnown RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 TRIM10Q9UDY6 481 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ARMCX3Q9UH62 379 aaPredicted RBP8.13□□□□□ -1.11
COL17A1-204ENST00000433822 ZBTB21Q9ULJ3 1066 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 PCDHGC4Q9Y5F7 938 aa8.13□□□□□ -1.11
COL17A1-204ENST00000433822 RPTORQ8N122 1335 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 A0A1W2PRG0 241 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 MEIS1O00470 390 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 PPIP5K2O43314 1243 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 RPS6KA5O75582 802 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 SEC31AO94979 1220 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 LYPLA2O95372 231 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 KRT18P05783 430 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ASNSP08243 561 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 OAS2P29728 719 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 EPS15P42566 896 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 PAFAH1B1P43034 410 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 HSD17B4P51659 736 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 NPEPPSP55786 919 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 TGFB2P61812 414 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 CASP8Q14790 479 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ASIC2Q16515 512 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 AOC3Q16853 763 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 EXOC3L4Q17RC7 722 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 CEP55Q53EZ4 464 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 NCAPH2Q6IBW4 605 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 RINT1Q6NUQ1 792 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 GBP6Q6ZN66 633 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 C1orf186Q6ZWK4 172 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 CHSY3Q70JA7 882 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 OTOP1Q7RTM1 612 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 SFR1Q86XK3 245 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 SLC17A8Q8NDX2 589 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 LPAR1Q92633 364 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 BORCS6Q96GS4 357 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 PRMT6Q96LA8 375 aaPredicted RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 OSBPL9Q96SU4 736 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 MMS19Q96T76 1030 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 REEP2Q9BRK0 252 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 LSM14BQ9BX40 385 aaKnown RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 STRA6Q9BX79 667 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 TANGO6Q9C0B7 1094 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ST6GALNAC4Q9H4F1 302 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ABCB6Q9NP58 842 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.12□□□□□ -1.11
COL17A1-204ENST00000433822 NENFQ9UMX5 172 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
COL17A1-204ENST00000433822 ASTN1O14525 1302 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 SHTN1A0MZ66 631 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 A6NNZ2 444 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 P4HA2O15460 535 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 TLR2O60603 784 aa8.11□□□□□ -1.11
COL17A1-204ENST00000433822 NR3C1P04150 777 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms