RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 FAM26FQ5R3K3 315 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PPP4R3AQ6IN85 833 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CLEC14AQ86T13 490 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SAMD3Q8N6K7 520 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SNX33Q8WV41 574 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ZSWIM3Q96MP5 696 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ADI1Q9BV57 179 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MSL2Q9HCI7 577 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CROTQ9UKG9 612 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CTDP1Q9Y5B0 961 aaPredicted RBP6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PMS2P1A4D2B8 440 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CCDC154A6NI56 674 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 FAM227AF5H4B4 570 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ETV2O00321 342 aaPredicted RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CTNND1O60716 968 aaKnown RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ENDOD1O94919 500 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RPLP2P05387 115 aaKnown RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 AGFG1P52594 562 aaKnown RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 USP14P54578 494 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CD69Q07108 199 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 HDAC1Q13547 482 aaPredicted RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 UAP1L1Q3KQV9 507 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ARHGAP29Q52LW3 1261 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 Q6ZUG5 572 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CATIPQ7Z7H3 387 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DENND1CQ8IV53 801 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PJA1Q8NG27 643 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NSUN6Q8TEA1 469 aaKnown RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NRG4Q8WWG1 115 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KCNN1Q92952 543 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CYFIP2Q96F07 1278 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 FAM84AQ96KN4 292 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PPP1R16BQ96T49 567 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ACO2Q99798 780 aaKnown RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DNM3Q9UQ16 869 aa6.68□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GASTP01350 101 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 HMGCRP04035 888 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DSC2Q02487 901 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MGAT5Q09328 741 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ZNF267Q14586 743 aaPredicted RBP6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PHF19Q5T6S3 580 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 THEMIS2Q5TEJ8 643 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TRMT10BQ6PF06 316 aaKnown RBP6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MIGA2Q7L4E1 593 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 OVCH2Q7RTZ1 564 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 STK32CQ86UX6 486 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KIAA0319LQ8IZA0 1049 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KLHL36Q8N4N3 616 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 FAM204AQ9H8W3 233 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 BCO1Q9HAY6 547 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NTMQ9P121 344 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ADAM29Q9UKF5 820 aa6.67□□□□□ -1.34
PTP4A1P3-201ENST00000433661 BICRAQ9NZM4 1560 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GSPT1P15170 499 aaKnown RBP6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RHCEP18577 417 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CRHR1P34998 444 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RHDQ02161 417 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SMAD4Q13485 552 aaKnown RBP6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CNKSR3Q6P9H4 555 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TTC7BQ86TV6 843 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PIK3C3Q8NEB9 887 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 OR2I1PQ8NGU4 316 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CARD11Q9BXL7 1154 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KCNK12Q9HB15 430 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DNAI1Q9UI46 699 aa6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
PTP4A1P3-201ENST00000433661 DAPK3O43293 454 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 B3GALT2O43825 422 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TSPAN15O95858 294 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CSF2RBP32927 897 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ADCY8P40145 1251 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RHBDL3P58872 404 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CDC42EP1Q00587 391 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 NFYCQ13952 458 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SEPT2Q15019 361 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MCTP1Q6DN14 999 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PPM1NQ8N819 430 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ZBTB34Q8NCN2 500 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LRGUKQ96M69 825 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 C14orf93Q9H972 538 aaKnown RBP6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 L2HGDHQ9H9P8 463 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KMT5AQ9NQR1 393 aa6.65□□□□□ -1.34
PTP4A1P3-201ENST00000433661 A6NNZ2 444 aa6.64□□□□□ -1.35
PTP4A1P3-201ENST00000433661 TPP1O14773 563 aa6.64□□□□□ -1.35
PTP4A1P3-201ENST00000433661 UBXN7O94888 489 aa6.64□□□□□ -1.35
PTP4A1P3-201ENST00000433661 ARIH2O95376 493 aa6.64□□□□□ -1.35
PTP4A1P3-201ENST00000433661 UBE3CQ15386 1083 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms