RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RAB27AP51159 221 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 GIT2Q14161 759 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 DSC3Q14574 896 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
TREX1-201ENST00000433541 BICD1Q96G01 975 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 MYMKA6NI61 221 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 C9IYK1 514 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 H0YCG3 227 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 ARF4P18085 180 aaPredicted RBP17.09■□□□□ 0.33
TREX1-201ENST00000433541 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
TREX1-201ENST00000433541 SYKP43405 635 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 AFMP43652 599 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 ASIC1P78348 528 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
TREX1-201ENST00000433541 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
TREX1-201ENST00000433541 CDR2LQ86X02 465 aaPredicted RBP17.09■□□□□ 0.33
TREX1-201ENST00000433541 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 PRIMPOLQ96LW4 560 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 FAM105AQ9NUU6 356 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 ADGRA3Q8IWK6 1321 aa17.09■□□□□ 0.33
TREX1-201ENST00000433541 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 LCHNA4D1U4 455 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 N4BP3O15049 544 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 HOXA2O43364 376 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 TRAK2O60296 914 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 NPTXRO95502 500 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 FGFR1P11362 822 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 E2F4Q16254 413 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 HACE1Q8IYU2 909 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 DEFB123Q8N688 67 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 ZNF576Q9H609 170 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 CERS4Q9HA82 394 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 SERTAD1Q9UHV2 236 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 MTUS1Q9ULD2 1270 aa17.08■□□□□ 0.32
TREX1-201ENST00000433541 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 A0A1W2PQD8 194 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 ACKR2O00590 384 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 GAP43P17677 238 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 GATMP50440 423 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 NDUFA8P51970 172 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 HERC4Q5GLZ8 1057 aaPredicted RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 SLC27A1Q6PCB7 646 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 Q7L0L9 218 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 APBB1IPQ7Z5R6 666 aaPredicted RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 FIBCD1Q8N539 461 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 SPIRE2Q8WWL2 714 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 CCDC34Q96HJ3 373 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 TCHPQ9BT92 498 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 CCDC113Q9H0I3 377 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 FZD8Q9H461 694 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 ELAC1Q9H777 363 aaKnown RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 MRPL44Q9H9J2 332 aaKnown RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 TBC1D7Q9P0N9 293 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 USP20Q9Y2K6 914 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 PCDHB2Q9Y5E7 798 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 TDRD15B5MCY1 1934 aaKnown RBP17.07■□□□□ 0.32
TREX1-201ENST00000433541 KIAA1671Q9BY89 1806 aa17.07■□□□□ 0.32
TREX1-201ENST00000433541 TMEM265A0A087WTH1 108 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 DGKIO75912 1065 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 EOMESO95936 686 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 HARSP12081 509 aaKnown RBP17.06■□□□□ 0.32
TREX1-201ENST00000433541 ITGA4P13612 1032 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 HOXA11P31270 313 aaPredicted RBP17.06■□□□□ 0.32
TREX1-201ENST00000433541 HTRA4P83105 476 aaPredicted RBP17.06■□□□□ 0.32
TREX1-201ENST00000433541 AMHR2Q16671 573 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 FAM187BQ17R55 369 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 ATF7IP2Q5U623 682 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 HELQQ8TDG4 1101 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 LPPQ93052 612 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 EIF2AQ9BY44 585 aaKnown RBP17.06■□□□□ 0.32
TREX1-201ENST00000433541 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 KBTBD4Q9NVX7 518 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
TREX1-201ENST00000433541 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 SLFN14P0C7P3 912 aa17.05■□□□□ 0.32
TREX1-201ENST00000433541 NMT1P30419 496 aaKnown RBP17.05■□□□□ 0.32
TREX1-201ENST00000433541 ZNF131P52739 623 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms