RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RHCEP18577 417 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 RHDQ02161 417 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 MLANAQ16655 118 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 KIAA0753Q2KHM9 967 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 TMEM200BQ69YZ2 307 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 KCNN1Q92952 543 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 MCOLN1Q9GZU1 580 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 HAPLN2Q9GZV7 340 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 TMEM60Q9H2L4 133 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 TDP1Q9NUW8 608 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP54-206ENST00000433394 POLHQ9Y253 713 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 IRAK3Q9Y616 596 aa7.48□□□□□ -1.21
USP54-206ENST00000433394 ZNF503-AS2A6NEH8 195 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 TPP1O14773 563 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 MGEA5O60502 916 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 ARIH2O95376 493 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 FTLP02792 175 aaPredicted RBP7.47□□□□□ -1.21
USP54-206ENST00000433394 HRGP04196 525 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 POLD1P28340 1107 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 KCNQ1P51787 676 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 SMAD4Q13485 552 aaKnown RBP7.47□□□□□ -1.21
USP54-206ENST00000433394 VPS72Q15906 364 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 RSPH3Q86UC2 560 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 RHOT1Q8IXI2 618 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 UNC5BQ8IZJ1 945 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 FAM43AQ8N2R8 423 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 LINC00482Q8N8I6 264 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 GCDHQ92947 438 aaPredicted RBP7.47□□□□□ -1.21
USP54-206ENST00000433394 RGMAQ96B86 450 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.47□□□□□ -1.21
USP54-206ENST00000433394 MAGEL2Q9UJ55 1249 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 CDC42EP3Q9UKI2 254 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 LIMCH1Q9UPQ0 1083 aa7.47□□□□□ -1.21
USP54-206ENST00000433394 MYOCOSA0A1B0GUC4 107 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 CAPN8A6NHC0 703 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 TUSC2O75896 110 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 UBXN7O94888 489 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 KNG1P01042 644 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 ITGB5P18084 799 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 ETV4P43268 484 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 ANO6Q4KMQ2 910 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 IL31Q6EBC2 164 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 IGDCC3Q8IVU1 814 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 SMC5Q8IY18 1101 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 DPF2Q92785 391 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 LPPQ93052 612 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 CYFIP2Q96F07 1278 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 SIGLEC10Q96LC7 697 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 EPB41L4AQ9HCS5 686 aaPredicted RBP7.46□□□□□ -1.22
USP54-206ENST00000433394 DMRT3Q9NQL9 472 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 DDX21Q9NR30 783 aaKnown RBP eCLIP7.46□□□□□ -1.22
USP54-206ENST00000433394 FAM184BQ9ULE4 1060 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 STXBP5LQ9Y2K9 1186 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 PTPN22Q9Y2R2 807 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 IPPQ9Y573 584 aa7.46□□□□□ -1.22
USP54-206ENST00000433394 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 GOLIM4O00461 696 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 SGTAO43765 313 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 B3GALT2O43825 422 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 LY86O95711 162 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 MYBP10242 640 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 IGFBP6P24592 240 aaPredicted RBP7.45□□□□□ -1.22
USP54-206ENST00000433394 HTR1BP28222 390 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 IL13P35225 146 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 THBS2P35442 1172 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 LIMS1P48059 325 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 NEK3P51956 506 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 CD69Q07108 199 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 EIF4HQ15056 248 aaKnown RBP7.45□□□□□ -1.22
USP54-206ENST00000433394 LLGL1Q15334 1064 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 ZNF568Q3ZCX4 644 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 GADL1Q6ZQY3 521 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 C3orf20Q8ND61 904 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 PPP1R14CQ8TAE6 165 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 ZNF480Q8WV37 535 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 SNX33Q8WV41 574 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 FAM167AQ96KS9 214 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 CGRRF1Q99675 332 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 ELAC2Q9BQ52 826 aaKnown RBP7.45□□□□□ -1.22
USP54-206ENST00000433394 C14orf93Q9H972 538 aaKnown RBP7.45□□□□□ -1.22
USP54-206ENST00000433394 BARX1Q9HBU1 254 aaPredicted RBP7.45□□□□□ -1.22
USP54-206ENST00000433394 CNNM1Q9NRU3 951 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 SCOCQ9UIL1 159 aa7.45□□□□□ -1.22
USP54-206ENST00000433394 LDHAP00338 332 aaKnown RBP7.44□□□□□ -1.22
USP54-206ENST00000433394 CYP1A1P04798 512 aaPredicted RBP7.44□□□□□ -1.22
USP54-206ENST00000433394 CTSSP25774 331 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 ADSLP30566 484 aaPredicted RBP7.44□□□□□ -1.22
USP54-206ENST00000433394 USP14P54578 494 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 EPHB3P54753 998 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 WNT3AP56704 352 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 ANTXR2P58335 489 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 DLG4P78352 724 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 GPSM2P81274 684 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 CDC42EP1Q00587 391 aa7.44□□□□□ -1.22
USP54-206ENST00000433394 C3orf36Q3SXR2 165 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms