RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 GFAPP14136 432 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 MAP4P27816 1152 aaKnown RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 CNGA3Q16281 694 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 RHPN2Q8IUC4 686 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 HSPBP1Q9NZL4 362 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 MYOM2P54296 1465 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 XDHP47989 1333 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 AKAP10O43572 662 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 ELF1P32519 619 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 CDK8P49336 464 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SH3KBP1Q96B97 665 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 ASNSD1Q9NWL6 643 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 AMACRQ9UHK6 382 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 PHF20L1A8MW92 1017 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ATP5HO75947 161 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 IFNA8P32881 189 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 CYFIP1Q7L576 1253 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 TEX12Q9BXU0 123 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ASPSCR1Q9BZE9 553 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 POTECB2RU33 542 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 GYS1P13807 737 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 GNA15P30679 374 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 GPC3P51654 580 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 CCDC142Q17RM4 750 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 AARS2Q5JTZ9 985 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 RARS2Q5T160 578 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 CLMNQ96JQ2 1002 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 TRIM51Q9BSJ1 452 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 RHBDL2Q9NX52 303 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ARSEP51690 589 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 FAM81BQ96LP2 452 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 THEMIS2Q5TEJ8 643 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 FLCNQ8NFG4 579 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 OR6P1Q8NGX9 317 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 SCG3Q8WXD2 468 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 SP110Q9HB58 689 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 HIC1Q14526 733 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 DRAP1Q14919 205 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 CATSPER4Q7RTX7 472 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 AGAP3Q96P47 875 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-206ENST00000431893 TRIM10Q9UDY6 481 aa12.12□□□□□ -0.47
SEC16A-206ENST00000431893 POTEFA5A3E0 1075 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 ORC4O43929 436 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 CHN1P15882 459 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 IL31Q6EBC2 164 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L6PQ6QN14 398 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 POTEEQ6S8J3 1075 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 RAD54LQ92698 747 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 CCDC188H7C350 402 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 PPARGP37231 505 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-206ENST00000431893 ANGPT1Q15389 498 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 SPDYAQ5MJ70 313 aa12.11□□□□□ -0.47
SEC16A-206ENST00000431893 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms