RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 CCDC85BQ15834 202 aaPredicted RBP15.78■□□□□ 0.12
LAMA4-208ENST00000431543 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 SV2BQ7L1I2 683 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 SRGAP1Q7Z6B7 1085 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 ECHDC2Q86YB7 292 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 TMEM192Q8IY95 271 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 BSNDQ8WZ55 320 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 RNF19AQ9NV58 838 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 PIN4Q9Y237 131 aaKnown RBP15.78■□□□□ 0.12
LAMA4-208ENST00000431543 MTCH2Q9Y6C9 303 aa15.78■□□□□ 0.12
LAMA4-208ENST00000431543 MRPL42Q9Y6G3 142 aaKnown RBP15.78■□□□□ 0.12
LAMA4-208ENST00000431543 A0A0U1RQF3 1178 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 EYA4O95677 639 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 SFPQP23246 707 aaKnown RBP eCLIP15.77■□□□□ 0.12
LAMA4-208ENST00000431543 HOXA11P31270 313 aaPredicted RBP15.77■□□□□ 0.12
LAMA4-208ENST00000431543 PHKA2P46019 1235 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 LONRF3Q496Y0 759 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 KRBA2Q6ZNG9 492 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 FAM43BQ6ZT52 329 aaPredicted RBP15.77■□□□□ 0.12
LAMA4-208ENST00000431543 ELOA2Q8IYF1 753 aaPredicted RBP15.77■□□□□ 0.12
LAMA4-208ENST00000431543 RNF169Q8NCN4 708 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 TMEM161AQ9NX61 479 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 HCSTQ9UBK5 93 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 SERTAD1Q9UHV2 236 aa15.77■□□□□ 0.12
LAMA4-208ENST00000431543 TBKBP1A7MCY6 615 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 SSBP05455 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 MYL1P05976 194 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 ATF7P17544 494 aaPredicted RBP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 MBTD1Q05BQ5 628 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 TFDP1Q14186 410 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 CCDC183Q5T5S1 534 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 ZNF598Q86UK7 904 aaKnown RBP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 MCPH1Q8NEM0 835 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 LARP4BQ92615 738 aaKnown RBP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 RAD54LQ92698 747 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 ELAC1Q9H777 363 aaKnown RBP15.76■□□□□ 0.11
LAMA4-208ENST00000431543 CHST12Q9NRB3 414 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 AGPAT5Q9NUQ2 364 aa15.76■□□□□ 0.11
LAMA4-208ENST00000431543 MEIS3P2A8K0S8 358 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 INO80B-WBP1J3KQ70 363 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 SMC2O95347 1197 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 PLA2G4BP0C869 781 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 POU3F3P20264 500 aaPredicted RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 BMPR1AP36894 532 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 POU5F1BQ06416 359 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 E2F4Q16254 413 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 AMHR2Q16671 573 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 CLLU1OSQ5K130 101 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 UBXN11Q5T124 520 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 TWF2Q6IBS0 349 aaKnown RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 LRRC55Q6ZSA7 311 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 LPPQ93052 612 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 CPB2Q96IY4 423 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 CASD1Q96PB1 797 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 RUSC1Q9BVN2 902 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 PRDM6Q9NQX0 595 aa15.75■□□□□ 0.11
LAMA4-208ENST00000431543 FNDC1Q4ZHG4 1894 aaPredicted RBP15.75■□□□□ 0.11
LAMA4-208ENST00000431543 PRRC2BQ5JSZ5 2229 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 A0A087X0B3 334 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 LRRIQ4A6NIV6 560 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 H3BNC9 293 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 B4GALT5O43286 388 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 ACTN4O43707 911 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 TSPAN1O60635 241 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 KRT18P05783 430 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 CTNNB1P35222 781 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 GPM6BQ13491 265 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 DHX8Q14562 1220 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 RINT1Q6NUQ1 792 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 C1orf186Q6ZWK4 172 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 DAW1Q8N136 415 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 PAGE5Q96GU1 130 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 TRAIPQ9BWF2 469 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 TYW1Q9NV66 732 aaKnown RBP15.74■□□□□ 0.11
LAMA4-208ENST00000431543 KCND2Q9NZV8 630 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 USP20Q9Y2K6 914 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 A0A0C4DFX4 3053 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 NLRC5Q86WI3 1866 aa15.74■□□□□ 0.11
LAMA4-208ENST00000431543 COL4A4P53420 1690 aaPredicted RBP15.73■□□□□ 0.11
LAMA4-208ENST00000431543 TTLL13PA6NNM8 815 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 EOMESO95936 686 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 AFMP43652 599 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 RAD51AP2Q09MP3 1159 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 CAMK4Q16566 473 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
LAMA4-208ENST00000431543 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
LAMA4-208ENST00000431543 HELQQ8TDG4 1101 aa15.73■□□□□ 0.11
LAMA4-208ENST00000431543 SAMD11Q96NU1 681 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms