RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 KLHDC9Q8NEP7 349 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 MTG1Q9BT17 334 aaPredicted RBP19.99■□□□□ 0.79
HMGN1-206ENST00000431390 UBE2OQ9C0C9 1292 aaKnown RBP19.99■□□□□ 0.79
HMGN1-206ENST00000431390 AGPAT3Q9NRZ7 376 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 CLCN3P51790 818 aa19.98■□□□□ 0.79
HMGN1-206ENST00000431390 EFNA5P52803 228 aa19.98■□□□□ 0.79
HMGN1-206ENST00000431390 COPB1P53618 953 aaKnown RBP19.98■□□□□ 0.79
HMGN1-206ENST00000431390 CDCA2Q69YH5 1023 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-206ENST00000431390 LMBR1Q8WVP7 490 aa19.98■□□□□ 0.79
HMGN1-206ENST00000431390 EEF2KMTQ96G04 330 aa19.98■□□□□ 0.79
HMGN1-206ENST00000431390 C2orf40Q9H1Z8 148 aa19.98■□□□□ 0.79
HMGN1-206ENST00000431390 MBLAC1A4D2B0 266 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-206ENST00000431390 SLC16A3O15427 465 aaKnown RBP19.97■□□□□ 0.79
HMGN1-206ENST00000431390 TPM2P07951 284 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 POU5F1BQ06416 359 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 NR1I3Q14994 352 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 TAS1R3Q7RTX0 852 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 RHPN2Q8IUC4 686 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 CREBRFQ8IUR6 639 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 TUBGCP2Q9BSJ2 902 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 RTN4Q9NQC3 1192 aaKnown RBP19.97■□□□□ 0.79
HMGN1-206ENST00000431390 SETD4Q9NVD3 440 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 DMAC2Q9NW81 257 aa19.97■□□□□ 0.79
HMGN1-206ENST00000431390 K7ERI5 159 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 CLIC2O15247 247 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 COL6A1P12109 1028 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 HOXC8P31273 242 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 MTIF2P46199 727 aaKnown RBP19.96■□□□□ 0.79
HMGN1-206ENST00000431390 ADAM17P78536 824 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 STRN3Q13033 797 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 NFRKBQ6P4R8 1299 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 ZBTB8OSQ8IWT0 167 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 PCSK9Q8NBP7 692 aaKnown RBP19.96■□□□□ 0.79
HMGN1-206ENST00000431390 RNF149Q8NC42 400 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 MKNK1Q9BUB5 465 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 NFKBIZQ9BYH8 718 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 IKZF4Q9H2S9 585 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 INTS13Q9NVM9 706 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 TAB2Q9NYJ8 693 aa19.96■□□□□ 0.79
HMGN1-206ENST00000431390 N4BP3O15049 544 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 GNAT1P11488 350 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 LRRC26Q2I0M4 334 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 CCDC40Q4G0X9 1142 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 LHX8Q68G74 356 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 CCSAPQ6IQ19 270 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-206ENST00000431390 FRMD5Q7Z6J6 570 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 RNF180Q86T96 592 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 ZBTB10Q96DT7 871 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 MAP7D2Q96T17 732 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 MTMR10Q9NXD2 777 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 STXBP5LQ9Y2K9 1186 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 SMIM35A0A1B0GVV1 85 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 PIGRP01833 764 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 PRKCSHP14314 528 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-206ENST00000431390 CHMP4BP1P59074 171 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 MAN2A1Q16706 1144 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 IFNLR1Q8IU57 520 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-206ENST00000431390 DRC7Q8IY82 874 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 C7orf31Q8N865 590 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 VPS16Q9H269 839 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 AKT3Q9Y243 479 aa19.95■□□□□ 0.78
HMGN1-206ENST00000431390 C17orf102A2RUQ5 167 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 LGALS16A8MUM7 142 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 GOLGA6L6A8MZA4 724 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 ASGR1P07306 291 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 SRGAP2CP0DJJ0 459 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 EPB41P11171 864 aaKnown RBP19.94■□□□□ 0.78
HMGN1-206ENST00000431390 PSMC2P35998 433 aaKnown RBP19.94■□□□□ 0.78
HMGN1-206ENST00000431390 PTENP60484 403 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 CDC42EP1Q00587 391 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 KCNA10Q16322 511 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 ARMCX5Q6P1M9 558 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 CXCL17Q6UXB2 119 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 KIAA0319LQ8IZA0 1049 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 NOC4LQ9BVI4 516 aaKnown RBP19.94■□□□□ 0.78
HMGN1-206ENST00000431390 CCDC113Q9H0I3 377 aa19.94■□□□□ 0.78
HMGN1-206ENST00000431390 METTL14Q9HCE5 456 aaKnown RBP19.94■□□□□ 0.78
HMGN1-206ENST00000431390 TRIP12Q14669 1992 aaPredicted RBP19.93■□□□□ 0.78
HMGN1-206ENST00000431390 HNRNPDLO14979 420 aaKnown RBP19.93■□□□□ 0.78
HMGN1-206ENST00000431390 AKAP3O75969 853 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 GARTP22102 1010 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 PHKA2P46019 1235 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 CEP135Q66GS9 1140 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 VSTM4Q8IW00 320 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 TRIM59Q8IWR1 403 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 BICD1Q96G01 975 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 NLRP4Q96MN2 994 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 HDAC6Q9UBN7 1215 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 FRMD4BQ9Y2L6 1034 aa19.93■□□□□ 0.78
HMGN1-206ENST00000431390 MAPK13O15264 365 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 TEX33O43247 280 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 CABYRO75952 493 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 LIG4P49917 911 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 CYP2J2P51589 502 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 PPP2R3AQ06190 1150 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 MAPK6Q16659 721 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 MIIPQ5JXC2 388 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 SLC39A4Q6P5W5 647 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 ZNF410Q86VK4 478 aa19.92■□□□□ 0.78
HMGN1-206ENST00000431390 SPC24Q8NBT2 197 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms