RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
MSH5-208ENST00000429846 RNF149Q8NC42 400 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 ASIC4Q96FT7 647 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 MTRQ99707 1265 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 POMKQ9H5K3 350 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 UBN1Q9NPG3 1134 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 LYPLA2O95372 231 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 NEFLP07196 543 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
MSH5-208ENST00000429846 SLC11A1P49279 550 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 MRE11P49959 708 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 AK2P54819 239 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 PTPN5P54829 565 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 POU5F1BQ06416 359 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 KIAA1841Q6NSI8 718 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 FAM193BQ96PV7 902 aaPredicted RBP16.61■□□□□ 0.25
MSH5-208ENST00000429846 TMEM175Q9BSA9 504 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 GBP3Q9H0R5 595 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 MINDY3Q9H8M7 445 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
MSH5-208ENST00000429846 TDRD15B5MCY1 1934 aaKnown RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 SP100P23497 879 aaPredicted RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 NR5A1Q13285 461 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 MTMR3Q13615 1198 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 TFDP1Q14186 410 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 PTPN14Q15678 1187 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 NOTUMQ6P988 496 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 ZNF280BQ86YH2 543 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 IFNLR1Q8IU57 520 aaPredicted RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 UBALD2Q8IYN6 164 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 BCL7CQ8WUZ0 217 aaPredicted RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 GTF3C6Q969F1 213 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 EMILIN2Q9BXX0 1053 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 BMP2KQ9NSY1 1161 aaPredicted RBP16.6■□□□□ 0.25
MSH5-208ENST00000429846 SORCS3Q9UPU3 1222 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 USTQ9Y2C2 406 aa16.6■□□□□ 0.25
MSH5-208ENST00000429846 C2CD4DB7Z1M9 353 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 INPPL1O15357 1258 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 EIF5BO60841 1220 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 DGAT1O75907 488 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 PTENP60484 403 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 NCBP1Q09161 790 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 CABP7Q86V35 215 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 TDRD5Q8NAT2 981 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 PRSS33Q8NF86 280 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 SLC22A17Q8WUG5 538 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 AUTS2Q8WXX7 1259 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
MSH5-208ENST00000429846 SFXN1Q9H9B4 322 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 ANKEF1Q9NU02 776 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
MSH5-208ENST00000429846 MYO10Q9HD67 2058 aa16.58■□□□□ 0.25
MSH5-208ENST00000429846 FAM205CA6NFA0 338 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 B4GALT3O60512 393 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 DDHD2O94830 711 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 SLITRK3O94933 977 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 ALDH2P05091 517 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 ITGA4P13612 1032 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 EPCAMP16422 314 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 NUBP1P53384 320 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 CALCRLQ16602 461 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 ZDHHC14Q8IZN3 488 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 CCDC43Q96MW1 224 aaKnown RBP16.58■□□□□ 0.24
MSH5-208ENST00000429846 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 VN1R3Q9BXE9 311 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 NFKBIZQ9BYH8 718 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
MSH5-208ENST00000429846 CDH22Q9UJ99 828 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 DBR1Q9UK59 544 aaKnown RBP16.58■□□□□ 0.24
MSH5-208ENST00000429846 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
MSH5-208ENST00000429846 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 NEMFO60524 1076 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 TSPAN1O60635 241 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 SOD2P04179 222 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 CLCN4P51793 760 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 ME3Q16798 604 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 HACE1Q8IYU2 909 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms