RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 APEX2Q9UBZ4 518 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PNMA3Q9UL41 463 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 SLC16A4O15374 487 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 DDX3YO15523 660 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 UBOX5O94941 541 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PPP3CAQ08209 521 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 SEMA3FQ13275 785 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 LRIG3Q6UXM1 1119 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 FAM167BQ9BTA0 163 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 WDR18Q9BV38 432 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 NUP85Q9BW27 656 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 STK33Q9BYT3 514 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 SLITRK6Q9H5Y7 841 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 WDR91A4D1P6 747 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 BMP3P12645 472 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 MAPK7Q13164 816 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PPP2R5AQ15172 486 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 GSTA5Q7RTV2 222 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 ARHGEF2Q92974 986 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 SGSM3Q96HU1 749 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PABPC3Q9H361 631 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
CDH3-202ENST00000429102 A0A1W2PRG0 241 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 CCT8L1PA6NM43 557 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 MYCLP12524 364 aaPredicted RBP13.42□□□□□ -0.26
CDH3-202ENST00000429102 ADCY8P40145 1251 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 PEX3P56589 373 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 SYCP2LQ5T4T6 812 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 TRIM68Q6AZZ1 485 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 ACSF2Q96CM8 615 aaPredicted RBP13.42□□□□□ -0.26
CDH3-202ENST00000429102 LXNQ9BS40 222 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 ROBO3Q96MS0 1386 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 POC1B-GALNT4F8VUJ3 575 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 IL1R1P14778 569 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 RNASELQ05823 741 aaKnown RBP13.42□□□□□ -0.26
CDH3-202ENST00000429102 C10orf76Q5T2E6 689 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 LENG9Q96B70 501 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 CSRNP1Q96S65 589 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 A0A1B0GUL6 1792 aa13.42□□□□□ -0.26
CDH3-202ENST00000429102 KIAA0391O15091 583 aaKnown RBP13.41□□□□□ -0.26
CDH3-202ENST00000429102 EYA4O95677 639 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 RARAP10276 462 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 CHKAP35790 457 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 NPEPPSP55786 919 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 PTENP60484 403 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 DGKZQ13574 1117 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 SGO2Q562F6 1265 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 FAM102BQ5T8I3 360 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 SPATS2Q86XZ4 545 aaKnown RBP13.41□□□□□ -0.26
CDH3-202ENST00000429102 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
CDH3-202ENST00000429102 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 AGAP1Q9UPQ3 857 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 IRS2Q9Y4H2 1338 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 TMEM120BA0PK00 339 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 NEDD9Q14511 834 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 C6orf89Q6UWU4 347 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 RUBCNQ92622 972 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 SUFUQ9UMX1 484 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 PI4K2BG5E9Z4 385 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 H0Y3Z8 333 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 GOLGA8SH3BPF8 625 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 GOLGA8MH3BSY2 632 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 hCG_1984214I3L0E3 225 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 THAP12O43422 761 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 RASSF9O75901 435 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 BCRP11274 1271 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 CETN1Q12798 172 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 PLA2G4FQ68DD2 849 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 ZNF713Q8N859 430 aaPredicted RBP13.41□□□□□ -0.26
CDH3-202ENST00000429102 KLHL29Q96CT2 875 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 FAM129AQ9BZQ8 928 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 TRPC6Q9Y210 931 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
CDH3-202ENST00000429102 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.41□□□□□ -0.26
CDH3-202ENST00000429102 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 GYS1P13807 737 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 PSMC4P43686 418 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 BFSP1Q12934 665 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 DUPD1Q68J44 220 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 DPY19L2P1Q6NXN4 242 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 ZDHHC24Q6UX98 284 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 ZNF720Q7Z2F6 126 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
CDH3-202ENST00000429102 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
CDH3-202ENST00000429102 ALG13Q9NP73 1137 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms