RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 LINC01465Q8N7H1 131 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF507Q8TCN5 953 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 PLEKHO2Q8TD55 490 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 UBE2Q2Q8WVN8 375 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 PAWRQ96IZ0 340 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 FAM167AQ96KS9 214 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIM5Q9C035 493 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 AGPAT3Q9NRZ7 376 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 ARHGAP28Q9P2N2 729 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CACNG4Q9UBN1 327 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 RWDD2AQ9UIY3 292 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 GPR32O75388 356 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CHRNA1P02708 482 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 MYL1P05976 194 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF18P17022 549 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CTCFP49711 727 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 GPC3P51654 580 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 KRT31Q15323 416 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 APTXQ7Z2E3 356 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 KIFAP3Q92845 792 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCDC127Q96BQ5 260 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 IFT74Q96LB3 600 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CNOT6LQ96LI5 555 aaKnown RBP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 SIP14410 1827 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 KCNJ18B7U540 433 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 MSCO60682 206 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 SERPINC1P01008 464 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 GNRH1P01148 92 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 NR3C1P04150 777 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 SLC26A2P50443 739 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 AFF1P51825 1210 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 FANCCQ00597 558 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 MBTD1Q05BQ5 628 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 NFX1Q12986 1120 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 KCNJ12Q14500 433 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 DCAF17Q5H9S7 520 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF484Q5JVG2 852 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 COL13A1Q5TAT6 717 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 SPATA1Q5VX52 437 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 THNSL1Q8IYQ7 743 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 FAM212AQ96EL1 285 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 SCLYQ96I15 445 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 GLT1D1Q96MS3 346 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 FAM213AQ9BRX8 229 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 TCHPQ9BT92 498 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 AGO3Q9H9G7 860 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 RNF225M0QZC1 329 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 DKC1O60832 514 aaKnown RBP eCLIP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 ADRB2P07550 413 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 GHRP10912 638 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 RFC5P40937 340 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCL23P55773 120 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 GTF2BQ00403 316 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 FBXO46Q6PJ61 603 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 TMCO2Q7Z6W1 182 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 RABGGTAQ92696 567 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCDC47Q96A33 483 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 APOL6Q9BWW8 343 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 EIF2AQ9BY44 585 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 LRRC27Q9C0I9 530 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 GBP3Q9H0R5 595 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 ADAMTS10Q9H324 1103 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
HMGCLL1-206ENST00000428842 PTPRJQ12913 1337 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 MBLAC1A4D2B0 266 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 MEFVO15553 781 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 GAP43P17677 238 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 ARF4P18085 180 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 IGFBP6P24592 240 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 ERCC5P28715 1186 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 SMTNP53814 917 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 MBTPS1Q14703 1052 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 TCP11X2Q5H9J9 407 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF618Q5T7W0 954 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 CDKAL1Q5VV42 579 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 IER5Q5VY09 327 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 RETREG2Q8NC44 543 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 CPLX3Q8WVH0 158 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 POMGNT1Q8WZA1 660 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 KCND2Q9NZV8 630 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 Q9Y3F1 56 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 PRKCBP05771 671 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 ITGB8P26012 769 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 NAMPTP43490 491 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 PSMD2Q13200 908 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 STIM1Q13586 685 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 AMHR2Q16671 573 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 TCTN1Q2MV58 587 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 FILIP1Q7Z7B0 1213 aa10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 DHTKD1Q96HY7 919 aaPredicted RBP10.42□□□□□ -0.74
HMGCLL1-206ENST00000428842 NTPCRQ9BSD7 190 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms