RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RSPH1Q8WYR4 309 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 CASP10Q92851 521 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 IGSF21Q96ID5 467 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 ZBP1Q9H171 429 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 RSAD1Q9HA92 442 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 XPNPEP1Q9NQW7 623 aa19.04■□□□□ 0.64
TRIM39-209ENST00000428728 ARIH1Q9Y4X5 557 aaPredicted RBP19.04■□□□□ 0.64
TRIM39-209ENST00000428728 POTEMA6NI47 508 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 CLASP2O75122 1294 aaKnown RBP19.03■□□□□ 0.64
TRIM39-209ENST00000428728 CXCL14O95715 111 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 GALTP07902 379 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 ATP2B1P20020 1258 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 SLC11A1P49279 550 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 BMS1Q14692 1282 aaKnown RBP19.03■□□□□ 0.64
TRIM39-209ENST00000428728 UBXN11Q5T124 520 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 S1PR5Q9H228 398 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 MYO10Q9HD67 2058 aa19.03■□□□□ 0.64
TRIM39-209ENST00000428728 ASAP2O43150 1006 aa19.02■□□□□ 0.64
TRIM39-209ENST00000428728 HOXB8P17481 243 aaPredicted RBP19.02■□□□□ 0.64
TRIM39-209ENST00000428728 HOXA11P31270 313 aaPredicted RBP19.02■□□□□ 0.64
TRIM39-209ENST00000428728 AFF1P51825 1210 aaKnown RBP19.02■□□□□ 0.64
TRIM39-209ENST00000428728 ZNF280BQ86YH2 543 aa19.02■□□□□ 0.64
TRIM39-209ENST00000428728 TMEM87AQ8NBN3 555 aa19.02■□□□□ 0.64
TRIM39-209ENST00000428728 EDAQ92838 391 aa19.02■□□□□ 0.64
TRIM39-209ENST00000428728 CPB2Q96IY4 423 aa19.02■□□□□ 0.64
TRIM39-209ENST00000428728 MUC6Q6W4X9 2439 aa19.02■□□□□ 0.63
TRIM39-209ENST00000428728 CNTNAP2Q9UHC6 1331 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 A0A087WWV3 80 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 INO80B-WBP1J3KQ70 363 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 TSPAN1O60635 241 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
TRIM39-209ENST00000428728 POMCP01189 267 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 MCM7P33993 719 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 CAPSQ13938 189 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 TFDP1Q14186 410 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 MXD4Q14582 209 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-209ENST00000428728 TPRNQ4KMQ1 711 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 DDX53Q86TM3 631 aaKnown RBP19.01■□□□□ 0.63
TRIM39-209ENST00000428728 CCDC83Q8IWF9 413 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 ASAP3Q8TDY4 903 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 PIGOQ8TEQ8 1089 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 FAM193BQ96PV7 902 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-209ENST00000428728 HSD17B14Q9BPX1 270 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 EIF2AQ9BY44 585 aaKnown RBP19.01■□□□□ 0.63
TRIM39-209ENST00000428728 TMEM60Q9H2L4 133 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
TRIM39-209ENST00000428728 CARNS1A5YM72 827 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 USO1O60763 962 aaKnown RBP19■□□□□ 0.63
TRIM39-209ENST00000428728 DGAT1O75907 488 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 DDHD2O94830 711 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 LYPLA2O95372 231 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 SSBP05455 408 aaKnown RBP eCLIP19■□□□□ 0.63
TRIM39-209ENST00000428728 CTSAP10619 480 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 RARRES1P49788 294 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 PTENP60484 403 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
TRIM39-209ENST00000428728 NOTUMQ6P988 496 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 MRPL10Q7Z7H8 261 aaKnown RBP19■□□□□ 0.63
TRIM39-209ENST00000428728 MTMR9Q96QG7 549 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 APOL6Q9BWW8 343 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 VN1R3Q9BXE9 311 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 POLR3FQ9H1D9 316 aaPredicted RBP19■□□□□ 0.63
TRIM39-209ENST00000428728 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 IPPQ9Y573 584 aa19■□□□□ 0.63
TRIM39-209ENST00000428728 WEE2P0C1S8 567 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 ITGA4P13612 1032 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 EPCAMP16422 314 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 NCLP19338 710 aaKnown RBP18.99■□□□□ 0.63
TRIM39-209ENST00000428728 ZXDAP98168 799 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRIM39-209ENST00000428728 CES5AQ6NT32 575 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 C12orf76Q8N812 135 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-209ENST00000428728 SMG8Q8ND04 991 aaKnown RBP18.99■□□□□ 0.63
TRIM39-209ENST00000428728 POMKQ9H5K3 350 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 HES2Q9Y543 173 aa18.99■□□□□ 0.63
TRIM39-209ENST00000428728 TMEM221A6NGB7 291 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 M0R296 226 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 GLRA2P23416 452 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 MLH1P40692 756 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 PTPN14Q15678 1187 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 TRIM67Q6ZTA4 783 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 MAEAQ7L5Y9 396 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 C8orf76Q96K31 380 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 KANSL3Q9P2N6 904 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 LIMCH1Q9UPQ0 1083 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 FAN1Q9Y2M0 1017 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 PRG3Q9Y2Y8 225 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-209ENST00000428728 TRIP11Q15643 1979 aa18.98■□□□□ 0.63
TRIM39-209ENST00000428728 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
TRIM39-209ENST00000428728 SPDYE4A6NLX3 237 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 ARF4P18085 180 aaPredicted RBP18.97■□□□□ 0.63
TRIM39-209ENST00000428728 AXLP30530 894 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 ARL2P36404 184 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 ITIH3Q06033 890 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 NCBP1Q09161 790 aaKnown RBP18.97■□□□□ 0.63
TRIM39-209ENST00000428728 GIT2Q14161 759 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 KANK3Q6NY19 840 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 ZBTB33Q86T24 672 aa18.97■□□□□ 0.63
TRIM39-209ENST00000428728 CDR2LQ86X02 465 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms