RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C1orf112Q9NSG2 853 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 AGPAT5Q9NUQ2 364 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 KBTBD4Q9NVX7 518 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 USP25Q9UHP3 1055 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 HPSEQ9Y251 543 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 ADGRA3Q8IWK6 1321 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 ARF4P18085 180 aaPredicted RBP16.02■□□□□ 0.16
SGCE-204ENST00000428696 PBX2P40425 430 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 CUL4BQ13620 913 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 DSC3Q14574 896 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 CDCA2Q69YH5 1023 aaPredicted RBP16.02■□□□□ 0.16
SGCE-204ENST00000428696 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 SPIRE2Q8WWL2 714 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 TOP1MTQ969P6 601 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 DNAJC19Q96DA6 116 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 APOL6Q9BWW8 343 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 MAGEF1Q9HAY2 307 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 TCHHQ07283 1943 aa16.02■□□□□ 0.16
SGCE-204ENST00000428696 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 H0YCG3 227 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 ACKR2O00590 384 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 GAP43P17677 238 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 PAN2Q504Q3 1202 aaKnown RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 ZC2HC1CQ53FD0 456 aaPredicted RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 KRBA2Q6ZNG9 492 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 ZBTB33Q86T24 672 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 HPS3Q969F9 1004 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 NTPCRQ9BSD7 190 aaKnown RBP16.02■□□□□ 0.15
SGCE-204ENST00000428696 TRIM9Q9C026 710 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 FZD8Q9H461 694 aa16.02■□□□□ 0.15
SGCE-204ENST00000428696 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 C9IYK1 514 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 GJB5O95377 273 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 GCNT3O95395 438 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 NPTXRO95502 500 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 FGFR1P11362 822 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 HARSP12081 509 aaKnown RBP16.01■□□□□ 0.15
SGCE-204ENST00000428696 AXLP30530 894 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 PCBP1Q15365 356 aaKnown RBP eCLIP16.01■□□□□ 0.15
SGCE-204ENST00000428696 AMHR2Q16671 573 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 ATF7IP2Q5U623 682 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 ECHDC2Q86YB7 292 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 NPAS4Q8IUM7 802 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 ABI1Q8IZP0 508 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 TMEM161BQ8NDZ6 487 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 LPPQ93052 612 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 LRCH3Q96II8 777 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 RAD9AQ99638 391 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
SGCE-204ENST00000428696 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
SGCE-204ENST00000428696 MRPL4Q9BYD3 311 aaKnown RBP16.01■□□□□ 0.15
SGCE-204ENST00000428696 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 TMEM134Q9H6X4 195 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 PCDHB2Q9Y5E7 798 aa16.01■□□□□ 0.15
SGCE-204ENST00000428696 LAMA2P24043 3122 aaKnown RBP16■□□□□ 0.15
SGCE-204ENST00000428696 A0A0U1RQF3 1178 aa16■□□□□ 0.15
SGCE-204ENST00000428696 FAM237AA0A1B0GTK4 181 aa16■□□□□ 0.15
SGCE-204ENST00000428696 SOX1O00570 391 aaPredicted RBP16■□□□□ 0.15
SGCE-204ENST00000428696 KINO60870 393 aaKnown RBP16■□□□□ 0.15
SGCE-204ENST00000428696 NR1I2O75469 434 aa16■□□□□ 0.15
SGCE-204ENST00000428696 MAPTP10636 758 aaKnown RBP16■□□□□ 0.15
SGCE-204ENST00000428696 SKIP12755 728 aa16■□□□□ 0.15
SGCE-204ENST00000428696 GATMP50440 423 aa16■□□□□ 0.15
SGCE-204ENST00000428696 ZNF131P52739 623 aa16■□□□□ 0.15
SGCE-204ENST00000428696 UBE2HP62256 183 aa16■□□□□ 0.15
SGCE-204ENST00000428696 SMAD3P84022 425 aaKnown RBP16■□□□□ 0.15
SGCE-204ENST00000428696 RAB30Q15771 203 aa16■□□□□ 0.15
SGCE-204ENST00000428696 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
SGCE-204ENST00000428696 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
SGCE-204ENST00000428696 PRIMPOLQ96LW4 560 aa16■□□□□ 0.15
SGCE-204ENST00000428696 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
SGCE-204ENST00000428696 PBX4Q9BYU1 374 aa16■□□□□ 0.15
SGCE-204ENST00000428696 SLC28A3Q9HAS3 691 aa16■□□□□ 0.15
SGCE-204ENST00000428696 ARHGAP28Q9P2N2 729 aa16■□□□□ 0.15
SGCE-204ENST00000428696 ANKFY1Q9P2R3 1169 aa16■□□□□ 0.15
SGCE-204ENST00000428696 SEL1LQ9UBV2 794 aa16■□□□□ 0.15
SGCE-204ENST00000428696 TBX20Q9UMR3 447 aa16■□□□□ 0.15
SGCE-204ENST00000428696 INPP5FQ9Y2H2 1132 aa16■□□□□ 0.15
SGCE-204ENST00000428696 HES2Q9Y543 173 aa16■□□□□ 0.15
SGCE-204ENST00000428696 INSL6Q9Y581 213 aa16■□□□□ 0.15
SGCE-204ENST00000428696 PHLPP2Q6ZVD8 1323 aa16■□□□□ 0.15
SGCE-204ENST00000428696 LOXHD1Q8IVV2 1947 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 TBKBP1A7MCY6 615 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 N4BP3O15049 544 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 CA3P07451 260 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 DNAJB2P25686 324 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms