RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 A1CFQ9NQ94 594 aaKnown RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 CFBP00751 764 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 FOSP01100 380 aaPredicted RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 CRKP46108 304 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 CCDC197Q8NCU1 140 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 KAT5Q92993 513 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 POP1Q99575 1024 aaKnown RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 ELAC2Q9BQ52 826 aaKnown RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 DMAC2Q9NW81 257 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 GGT7Q9UJ14 662 aa16.98■□□□□ 0.31
GHDC-203ENST00000428494 DIS3Q9Y2L1 958 aaKnown RBP16.98■□□□□ 0.31
GHDC-203ENST00000428494 MYH11P35749 1972 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 FAM187AA6NFU0 413 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 CCT8L1PA6NM43 557 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 PYGMP11217 842 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
GHDC-203ENST00000428494 DHX34Q14147 1143 aaKnown RBP16.97■□□□□ 0.31
GHDC-203ENST00000428494 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 CCDC137Q6PK04 289 aaKnown RBP16.97■□□□□ 0.31
GHDC-203ENST00000428494 SYCP3Q8IZU3 236 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 CENPTQ96BT3 561 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 PGM2Q96G03 612 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 FOXO6A8MYZ6 492 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 PHF2O75151 1096 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 COMTP21964 271 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 BFSP1Q12934 665 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 KIF22Q14807 665 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 ARMC9Q7Z3E5 817 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 CCDC25Q86WR0 208 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 KDM4CQ9H3R0 1056 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
GHDC-203ENST00000428494 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.97■□□□□ 0.31
GHDC-203ENST00000428494 PCDHA3Q9Y5H8 950 aa16.97■□□□□ 0.31
GHDC-203ENST00000428494 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 HSPA1LP34931 641 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 XRCC4Q13426 336 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 SLC15A2Q16348 729 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 SP8Q8IXZ3 490 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 RPUSD2Q8IZ73 545 aaKnown RBP16.96■□□□□ 0.31
GHDC-203ENST00000428494 PCDHB18PQ96TA0 734 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 MKNK1Q9BUB5 465 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 TRPC6Q9Y210 931 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 SUGT1Q9Y2Z0 365 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
GHDC-203ENST00000428494 PSMD10O75832 226 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 VIMP08670 466 aaKnown RBP16.96■□□□□ 0.3
GHDC-203ENST00000428494 GCLMP48507 274 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 PPP3CAQ08209 521 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 PPP1R7Q15435 360 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 VPS72Q15906 364 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 PREPLQ4J6C6 727 aaPredicted RBP16.96■□□□□ 0.3
GHDC-203ENST00000428494 ELMO3Q96BJ8 720 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 ZSWIM1Q9BR11 485 aa16.96■□□□□ 0.3
GHDC-203ENST00000428494 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 G3V3G9 751 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 SGPL1O95470 568 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 PEX5P50542 639 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 DRG2P55039 364 aaKnown RBP16.95■□□□□ 0.3
GHDC-203ENST00000428494 LRRC14Q15048 493 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 FAM133BQ5BKY9 247 aaKnown RBP16.95■□□□□ 0.3
GHDC-203ENST00000428494 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
GHDC-203ENST00000428494 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 PIGWQ7Z7B1 504 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 SH2D3AQ9BRG2 576 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.3
GHDC-203ENST00000428494 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 RASAL2Q9UJF2 1139 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 BMP3P12645 472 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 CREB1P16220 341 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 CHRNA3P32297 505 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 RRP1BQ14684 758 aaKnown RBP16.95■□□□□ 0.3
GHDC-203ENST00000428494 PPP2R5EQ16537 467 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
GHDC-203ENST00000428494 EP400NLQ6ZTU2 488 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 CCDC105Q8IYK2 499 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 PRR12Q9ULL5 1215 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 CD2APQ9Y5K6 639 aa16.95■□□□□ 0.3
GHDC-203ENST00000428494 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 RIPK2O43353 540 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 GH2P01242 217 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 CYP3A4P08684 503 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 CTNNA2P26232 953 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 ELF3P78545 371 aaPredicted RBP16.94■□□□□ 0.3
GHDC-203ENST00000428494 ABCB5Q2M3G0 1257 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 TRMT1LQ7Z2T5 733 aaKnown RBP16.94■□□□□ 0.3
GHDC-203ENST00000428494 RHOT2Q8IXI1 618 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 DAW1Q8N136 415 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 UBL4BQ8N7F7 174 aa16.94■□□□□ 0.3
GHDC-203ENST00000428494 MGARPQ8TDB4 240 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms