RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 DCDC2CA8MYV0 355 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 PPP1R12AO14974 1030 aaPredicted RBP16.2■□□□□ 0.18
SCAP-206ENST00000428413 MMEP08473 750 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 LONRF1Q17RB8 773 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 RNF207Q6ZRF8 634 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 HSPBP1Q9NZL4 362 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 ZNF148Q9UQR1 794 aa16.2■□□□□ 0.18
SCAP-206ENST00000428413 YWHABP31946 246 aaKnown RBP16.19■□□□□ 0.18
SCAP-206ENST00000428413 BFSP1Q12934 665 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 ACCSQ96QU6 501 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 CCT8L2Q96SF2 557 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 VPS37BQ9H9H4 285 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 APEX2Q9UBZ4 518 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 GAKO14976 1311 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 ZNF233A6NK53 670 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 YY1P25490 414 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 CCDC137Q6PK04 289 aaKnown RBP16.19■□□□□ 0.18
SCAP-206ENST00000428413 ATP6V1G3Q96LB4 118 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 RAB17Q9H0T7 212 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 INTS9Q9NV88 658 aaKnown RBP16.19■□□□□ 0.18
SCAP-206ENST00000428413 NUP98P52948 1817 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 MAP3K6O95382 1288 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 GAP43P17677 238 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 KRT15P19012 456 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 STRN3Q13033 797 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 SLC29A2Q14542 456 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 C10orf76Q5T2E6 689 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 MEI1Q5TIA1 1274 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 OTOP1Q7RTM1 612 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
SCAP-206ENST00000428413 IQCDQ96DY2 449 aa16.19■□□□□ 0.18
SCAP-206ENST00000428413 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
SCAP-206ENST00000428413 THAP12O43422 761 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 TFAMQ00059 246 aaKnown RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 DACT2Q5SW24 774 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 ALS2CLQ60I27 953 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 SNRNP48Q6IEG0 339 aaKnown RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 ZDHHC15Q96MV8 337 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 AGPAT1Q99943 283 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 NEUROG2Q9H2A3 272 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 COL4A1P02462 1669 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 EIF3HO15372 352 aaKnown RBP eCLIP16.18■□□□□ 0.18
SCAP-206ENST00000428413 TGFB1I1O43294 461 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 TTC16Q8NEE8 873 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 TATDN2Q93075 761 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PBKQ96KB5 322 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 IMPG2Q9BZV3 1241 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 SAMD15Q9P1V8 674 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 MAGED2Q9UNF1 606 aaPredicted RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 AGTPBP1Q9UPW5 1226 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 EDIL3O43854 480 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 ATP9AO75110 1047 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 FIGNQ5HY92 759 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PHLDB3Q6NSJ2 640 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 IRF2BP2Q7Z5L9 587 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 NCAPG2Q86XI2 1143 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 AENQ8WTP8 325 aaKnown RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 ATG4CQ96DT6 458 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 PSD3Q9NYI0 1048 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.18■□□□□ 0.18
SCAP-206ENST00000428413 ASTN1O14525 1302 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 IGSF9BQ9UPX0 1349 aa16.18■□□□□ 0.18
SCAP-206ENST00000428413 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 NSFP46459 744 aaKnown RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 PPATQ06203 517 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 ZNF720Q7Z2F6 126 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 NLRP14Q86W24 1093 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 N4BP2L2Q92802 583 aaPredicted RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 FAM163AQ96GL9 167 aaPredicted RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 ALG13Q9NP73 1137 aaKnown RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 PHRF1Q9P1Y6 1649 aaKnown RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 SREBF1P36956 1147 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 KIFAP3Q92845 792 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 WRNIP1Q96S55 665 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 TRIM7Q9C029 511 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 KCNMB3Q9NPA1 279 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 MYH6P13533 1939 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 CRYBG1Q9Y4K1 1723 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 CAND2O75155 1236 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 PPP1R37O75864 691 aa16.17■□□□□ 0.18
SCAP-206ENST00000428413 SWT1Q5T5J6 900 aaKnown RBP16.17■□□□□ 0.18
SCAP-206ENST00000428413 BSPRYQ5W0U4 402 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms