RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NLRC4Q9NPP4 1024 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 EURLQ9NYK6 297 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 EHD2Q9NZN4 543 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TRIM10Q9UDY6 481 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 BCAP29Q9UHQ4 241 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TSC22D4Q9Y3Q8 395 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MYPNQ86TC9 1320 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX60Q8IY21 1712 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 NALCNQ8IZF0 1738 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FMN2Q9NZ56 1722 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 LAMA4Q16363 1823 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MYH8P13535 1937 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 A0A0J9YVX5 310 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 KIF28PB7ZC32 967 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 H3BNX3 289 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GRM8O00222 908 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PIK3CDO00329 1044 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 HGSO14964 777 aaPredicted RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 RNF113AO15541 343 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 AP1G1O43747 822 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SUPT3HO75486 399 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MTRF1O75570 445 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GNA14O95837 355 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 AFPP02771 609 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 RPN1P04843 607 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM153BP0C7A2 387 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 HSPD1P10809 573 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 IFNAR1P17181 557 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 NAT1P18440 290 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FLT3P36888 993 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAGEA10P43363 369 aaPredicted RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PCYT1AP49585 367 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 USP11P51784 963 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 STX17P56962 302 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GEMIN4P57678 1058 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ERVK-9P63128 1117 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GUCA2AQ02747 115 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GSTM4Q03013 218 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FOXC1Q12948 553 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CALCOCO2Q13137 446 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 EIF4A2Q14240 407 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 EZH2Q15910 746 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CNGA2Q16280 664 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SPRED3Q2MJR0 410 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM153CQ494X1 144 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PKDCCQ504Y2 493 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 TDRD12Q587J7 1177 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SYDE2Q5VT97 1194 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 KLHDC7AQ5VTJ3 777 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 TMEM132EQ6IEE7 984 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CNNM4Q6P4Q7 775 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 C16orf87Q6PH81 154 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 C1orf228Q6PIY5 440 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PACS1Q6VY07 963 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 RGS9BPQ6ZS82 235 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CENPUQ71F23 418 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SGMS1Q86VZ5 419 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SFR1Q86XK3 245 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX42Q86XP3 938 aaKnown RBP eCLIP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ANKRD13BQ86YJ7 626 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 C2CD5Q86YS7 1000 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SCUBE1Q8IWY4 988 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 DIS3L2Q8IYB7 885 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZBED8Q8IZ13 594 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ADSSL1Q8N142 457 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 VPS52Q8N1B4 723 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTC39CQ8N584 583 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SRBD1Q8N5C6 995 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CSGALNACT2Q8N6G5 542 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ALLCQ8N6M5 410 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC89Q8N998 374 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MINDY2Q8NBR6 621 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 BBOF1Q8ND07 529 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PHC3Q8NDX5 983 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM13CQ8NE31 585 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 GDAP1Q8TB36 358 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCDC110Q8TBZ0 833 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SCFD2Q8WU76 684 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CKAP2Q8WWK9 683 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 SPIRE2Q8WWL2 714 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PRCCQ92733 491 aaPredicted RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MPP4Q96JB8 637 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 BTBD9Q96Q07 612 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 TGS1Q96RS0 853 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 OLFM1Q99784 485 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 TSG101Q99816 390 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CCT7Q99832 543 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 RTFDC1Q9BY42 306 aaPredicted RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 MRPS26Q9BYN8 205 aaKnown RBP6□□□□□ -1.45
VTI1BP4-201ENST00000427516 COPRSQ9NQ92 184 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PAG1Q9NWQ8 432 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 NLRP2Q9NX02 1062 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZDHHC7Q9NXF8 308 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 CEP72Q9P209 647 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 UVRAGQ9P2Y5 699 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 EPS15L1Q9UBC2 864 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 PRKAG3Q9UGI9 489 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAM153AQ9UHL3 310 aa6□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNHIT2Q9UHR6 403 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms