RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 IGSF9Q9P2J2 1179 aa9.75□□□□□ -0.85
VNN3-208ENST00000427187 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
VNN3-208ENST00000427187 PCDHB2Q9Y5E7 798 aa9.75□□□□□ -0.85
VNN3-208ENST00000427187 CLUHO75153 1309 aa9.75□□□□□ -0.85
VNN3-208ENST00000427187 FANCMQ8IYD8 2048 aa9.75□□□□□ -0.85
VNN3-208ENST00000427187 ESYT2A0FGR8 921 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 NRP1O14786 923 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 URODP06132 367 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 CIITAP33076 1130 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 JAK3P52333 1124 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 GET4Q7L5D6 327 aaPredicted RBP9.74□□□□□ -0.85
VNN3-208ENST00000427187 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
VNN3-208ENST00000427187 MIER3Q7Z3K6 550 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 SKAP1Q86WV1 359 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 URGCPQ8TCY9 931 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 SMG7Q92540 1137 aaKnown RBP9.74□□□□□ -0.85
VNN3-208ENST00000427187 SLC5A5Q92911 643 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 FAM193BQ96PV7 902 aaPredicted RBP9.74□□□□□ -0.85
VNN3-208ENST00000427187 TRAIPQ9BWF2 469 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 FOXQ1Q9C009 403 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 MINDY3Q9H8M7 445 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 RSAD1Q9HA92 442 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 WDR6Q9NNW5 1121 aaKnown RBP9.74□□□□□ -0.85
VNN3-208ENST00000427187 VPS54Q9P1Q0 977 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 WNT16Q9UBV4 365 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 FAN1Q9Y2M0 1017 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 ZFHX4Q86UP3 3567 aa9.74□□□□□ -0.85
VNN3-208ENST00000427187 ACACBO00763 2458 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 DDX11L8A8MPP1 907 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ZNF623O75123 536 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 KRT37O76014 449 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 TDP2O95551 362 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 GLUD1P00367 558 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 SOD2P04179 222 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ALDH2P05091 517 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 SP9P0CG40 484 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 SRFP11831 508 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 SKIP12755 728 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 GLULP15104 373 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 OR1G1P47890 313 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 DNM2P50570 870 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 RAB27AP51159 221 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 XKR3Q5GH77 459 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 UBXN11Q5T124 520 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ZNF410Q86VK4 478 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 PALB2Q86YC2 1186 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
VNN3-208ENST00000427187 ZNF707Q96C28 371 aaPredicted RBP9.73□□□□□ -0.85
VNN3-208ENST00000427187 PGBD4Q96DM1 585 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 HERC2P3Q9BVR0 1158 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
VNN3-208ENST00000427187 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 AGPAT5Q9NUQ2 364 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 EPS15L1Q9UBC2 864 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 MYH15Q9Y2K3 1946 aa9.73□□□□□ -0.85
VNN3-208ENST00000427187 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 MIA3Q5JRA6 1907 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 MAFO75444 373 aaPredicted RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 PSMD10O75832 226 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 ADH1AP07327 375 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 SRGAP2CP0DJJ0 459 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 RPL17P18621 184 aaKnown RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 GNA11P29992 359 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 SFNP31947 248 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 MLH1P40692 756 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 GLUD2P49448 558 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 NPEPPSP55786 919 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 FGD1P98174 961 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 PUM1Q14671 1186 aaKnown RBP eCLIP9.72□□□□□ -0.85
VNN3-208ENST00000427187 RNF20Q5VTR2 975 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 ANO5Q75V66 913 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 CMASQ8NFW8 434 aaPredicted RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 TBCKQ8TEA7 893 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 CCDC12Q8WUD4 166 aaPredicted RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 RABGGTAQ92696 567 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 STAMQ92783 540 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 CNTNAP3BQ96NU0 1288 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 RIT2Q99578 217 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 TMEM175Q9BSA9 504 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 RPP25Q9BUL9 199 aaKnown RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 APOL6Q9BWW8 343 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 EIF2AQ9BY44 585 aaKnown RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 CNTNAP3Q9BZ76 1288 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 INO80BQ9C086 356 aaPredicted RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 PIDD1Q9HB75 910 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 HES2Q9Y543 173 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 NUMBLQ9Y6R0 609 aa9.72□□□□□ -0.85
VNN3-208ENST00000427187 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
VNN3-208ENST00000427187 CARNS1A5YM72 827 aa9.71□□□□□ -0.86
VNN3-208ENST00000427187 PRPF3O43395 683 aaKnown RBP9.71□□□□□ -0.86
VNN3-208ENST00000427187 TGM5O43548 720 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms