RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 TLL1O43897 1013 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 DGKIO75912 1065 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 NCKAP1LP55160 1127 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 CNNM4Q6P4Q7 775 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 ECHDC2Q86YB7 292 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 TMEM161BQ8NDZ6 487 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 PYM1Q9BRP8 204 aaKnown RBP23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 TMEM134Q9H6X4 195 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 MAGEF1Q9HAY2 307 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 PARVGQ9HBI0 331 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 KMT5AQ9NQR1 393 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 TMEM161AQ9NX61 479 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 KCNG1Q9UIX4 513 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 MSRAQ9UJ68 235 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 INSL6Q9Y581 213 aa23.72■■□□□ 1.39
RPUSD3-205ENST00000427174 PHLPP2Q6ZVD8 1323 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 TMEM265A0A087WTH1 108 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 A0A1B0GUA9 196 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 LCHNA4D1U4 455 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 ACKR2O00590 384 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 SLC16A4O15374 487 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 ACTN4O43707 911 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 ZNF623O75123 536 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 ARHGEF15O94989 841 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 PRKCBP05771 671 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 STAG3L1P0CL83 205 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 MAPK6Q16659 721 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 TWF2Q6IBS0 349 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 DYMQ7RTS9 669 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 STAMQ92783 540 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 TIFAQ96CG3 184 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 CCDC51Q96ER9 411 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 CPB2Q96IY4 423 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 ZBED2Q9BTP6 218 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 NKX2-4Q9H2Z4 354 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 FAM105AQ9NUU6 356 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 RNF19AQ9NV58 838 aa23.71■■□□□ 1.39
RPUSD3-205ENST00000427174 FAM13AO94988 1023 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 KRT18P05783 430 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 CA3P07451 260 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 NDUFA8P51970 172 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 NOTUMQ6P988 496 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 FSIP1Q8NA03 581 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 MRPS27Q92552 414 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 TRIM9Q9C026 710 aa23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 TTYH1Q9H313 450 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 RNF216Q9NWF9 866 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-205ENST00000427174 TDRD15B5MCY1 1934 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 K7ERI5 159 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 TBCAO75347 108 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 EOMESO95936 686 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 SLFN14P0C7P3 912 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 MAPTP10636 758 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 RAB27AP51159 221 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 SMTNP53814 917 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 NT5DC1Q5TFE4 455 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 MRPL10Q7Z7H8 261 aaKnown RBP23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 MYCT1Q8N699 235 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 SERTAD1Q9UHV2 236 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 PCDHB7Q9Y5E2 793 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 CITO14578 2027 aa23.69■■□□□ 1.38
RPUSD3-205ENST00000427174 TRAK2O60296 914 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 PRPF4BQ13523 1007 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 LONRF3Q496Y0 759 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 YME1L1Q96TA2 773 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 C7orf25Q9BPX7 421 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 EIF2AQ9BY44 585 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 LRRC27Q9C0I9 530 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 ST6GALNAC4Q9H4F1 302 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 PDZD7Q9H5P4 517 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 USP25Q9UHP3 1055 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 USP20Q9Y2K6 914 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 PCDHB2Q9Y5E7 798 aa23.68■■□□□ 1.38
RPUSD3-205ENST00000427174 LINC01553A4QN01 128 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 LINC00271P0C7V0 271 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SKIP12755 728 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 GAP43P17677 238 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SCP2P22307 547 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SYKP43405 635 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 GATMP50440 423 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 AMPD3Q01432 767 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 TAP1Q03518 808 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 NCBP1Q09161 790 aaKnown RBP23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SLC27A1Q6PCB7 646 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 HAUS6Q7Z4H7 955 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SFR1Q86XK3 245 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SMG8Q8ND04 991 aaKnown RBP23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 SEL1LQ9UBV2 794 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 LRFN2Q9ULH4 789 aa23.67■■□□□ 1.38
RPUSD3-205ENST00000427174 H0YCG3 227 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 CLLU1OSQ5K130 101 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 CLEC17AQ6ZS10 378 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 CDR2LQ86X02 465 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 ACO2Q99798 780 aaKnown RBP23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 STRA6Q9BX79 667 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 ZNF576Q9H609 170 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 SLC28A3Q9HAS3 691 aa23.66■■□□□ 1.38
RPUSD3-205ENST00000427174 PTPRHQ9HD43 1115 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms