RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 POLR3CQ9BUI4 534 aaPredicted RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 GPBP1L1Q9HC44 474 aaPredicted RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 HOXA2O43364 376 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 MT-ND3P03897 115 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 GYS1P13807 737 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 GNA15P30679 374 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 SCARA5Q6ZMJ2 495 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 CEP57Q86XR8 500 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 INTS2Q9H0H0 1204 aaKnown RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 ICAM1P05362 532 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 CDK17Q00537 523 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 ATG16L1Q676U5 607 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 CAPS2Q9BXY5 557 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 UBN1Q9NPG3 1134 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 IGSF9BQ9UPX0 1349 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 PRCPP42785 496 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 RPUSD2Q8IZ73 545 aaKnown RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 ANKRD13CQ8N6S4 541 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 AAASQ9NRG9 546 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 SNAP23O00161 211 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 DCAF4L1Q3SXM0 396 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 INTS9Q9NV88 658 aaKnown RBP10.86□□□□□ -0.67
SP1-202ENST00000426431 GDAQ9Y2T3 454 aa10.86□□□□□ -0.67
SP1-202ENST00000426431 MAP3K7O43318 606 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 ACADSBP45954 432 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 SGSM1Q2NKQ1 1148 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.85□□□□□ -0.67
SP1-202ENST00000426431 ATP6V1E2Q96A05 226 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 KIF12Q96FN5 646 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 ABHD10Q9NUJ1 306 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 A0A1B0GUA9 196 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 KRT38O76015 456 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 PCSK1P29120 753 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 GCLMP48507 274 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 MAPRE1Q15691 268 aaKnown RBP10.85□□□□□ -0.67
SP1-202ENST00000426431 SYDE1Q6ZW31 735 aaPredicted RBP10.85□□□□□ -0.67
SP1-202ENST00000426431 RHOT1Q8IXI2 618 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 CEP120Q8N960 986 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 EPS15L1Q9UBC2 864 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 INPP5FQ9Y2H2 1132 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 TDP2O95551 362 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 TTC4O95801 387 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 ZNF18P17022 549 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 MED15Q96RN5 788 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
SP1-202ENST00000426431 HUNKP57058 714 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 NXNQ6DKJ4 435 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 KLHL38Q2WGJ6 581 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 DCP1BQ8IZD4 617 aaKnown RBP10.85□□□□□ -0.67
SP1-202ENST00000426431 RNF149Q8NC42 400 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 RPA1P27694 616 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 ZNF677Q86XU0 584 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 PYROXD1Q8WU10 500 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 PIDD1Q9HB75 910 aa10.85□□□□□ -0.67
SP1-202ENST00000426431 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
SP1-202ENST00000426431 SMAPO00193 183 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 CYBBP04839 570 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 STAG3L1P0CL83 205 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 SV2CQ496J9 727 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 SCN4BQ8IWT1 228 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 RASSF4Q9H2L5 321 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 FAM187AA6NFU0 413 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 A8MXQ7 604 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 SOX5P35711 763 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 CAP2P40123 477 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 ZNF484Q5JVG2 852 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 EPB41L5Q9HCM4 733 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 UVRAGQ9P2Y5 699 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 PPP1R12AO14974 1030 aaPredicted RBP10.84□□□□□ -0.67
SP1-202ENST00000426431 PLSCR1O15162 318 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 RHOBTB3O94955 611 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 IL1R1P14778 569 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 CHRNA3P32297 505 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 GLB1LQ6UWU2 654 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 EPAS1Q99814 870 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 PTPN22Q9Y2R2 807 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 FAM205AQ6ZU69 1335 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 M0QYV0 167 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 EFHD1Q9BUP0 239 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 KLHL8Q9P2G9 620 aaPredicted RBP10.84□□□□□ -0.67
SP1-202ENST00000426431 ZMYM2Q9UBW7 1377 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 CXCL11O14625 94 aa10.84□□□□□ -0.67
SP1-202ENST00000426431 OAZ1P54368 228 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms