RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TRADDQ15628 312 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 ZNF658Q5TYW1 1059 aaPredicted RBP17.18■□□□□ 0.34
PKP4-205ENST00000426248 TLDC1Q6P9B6 456 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 FAM47EQ6ZV65 393 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 DLGAP2Q9P1A6 1054 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 CETN3O15182 167 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 NR3C2P08235 984 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 ARP10275 920 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 FCER1AP12319 257 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 CREG2Q8IUH2 290 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 RDH13Q8NBN7 331 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■■ 83.7
PKP4-205ENST00000426248 ATP8A1Q9Y2Q0 1164 aa17.18■□□□□ 0.34
PKP4-205ENST00000426248 FDX1P10109 184 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 PRCPP42785 496 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 KLK7P49862 253 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 KCNJ2P63252 427 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 TMEM154Q6P9G4 183 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 EIF2AK1Q9BQI3 630 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 LUC7LQ9NQ29 371 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 INTS9Q9NV88 658 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 MYH1P12882 1939 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 PLEKP08567 350 aaPredicted RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 SREBF1P36956 1147 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 PDIA5Q14554 519 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 ANKRD20A2Q5SQ80 823 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 ANKRD20A1Q5TYW2 823 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 ANKRD20A3Q5VUR7 823 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 RRAGAQ7L523 313 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 P2RX7Q99572 595 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 KCNK3O14649 394 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 CREB3O43889 395 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 XRCC4Q13426 336 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 DCAF17Q5H9S7 520 aaPredicted RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 RAD54LQ92698 747 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 DDX23Q9BUQ8 820 aaKnown RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 CORO1CQ9ULV4 474 aaPredicted RBP17.17■□□□□ 0.34
PKP4-205ENST00000426248 PCDHA13Q9Y5I0 950 aa17.17■□□□□ 0.34
PKP4-205ENST00000426248 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.342e-7■■□□□ 13.3
PKP4-205ENST00000426248 SLCO1A2P46721 670 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 SNAPC2Q13487 334 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 CCL15Q16663 113 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 FAM102BQ5T8I3 360 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 GBP5Q96PP8 586 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 KCNK9Q9NPC2 374 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 C2CD2Q9Y426 696 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 AHCYL1O43865 530 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 MGRN1O60291 552 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 RAD23BP54727 409 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 CCNA1P78396 465 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 ZC3H12AQ5D1E8 599 aaKnown RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 NAF1Q96HR8 494 aaKnown RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 ZNF570Q96NI8 536 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 AP1M1Q9BXS5 423 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 TRAPPC3O43617 180 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 DHX9Q08211 1270 aaKnown RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 ORC2Q13416 577 aaPredicted RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
PKP4-205ENST00000426248 SLC38A10Q9HBR0 1119 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 GINS2Q9Y248 185 aa17.16■□□□□ 0.34
PKP4-205ENST00000426248 A8MUI8 341 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 TPP2P29144 1249 aaPredicted RBP17.15■□□□□ 0.34
PKP4-205ENST00000426248 EIF4A3P38919 411 aaKnown RBP17.15■□□□□ 0.34
PKP4-205ENST00000426248 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 ANKRD42Q8N9B4 389 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 CASKIN2Q8WXE0 1202 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 TCHPQ9BT92 498 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 MLXIPLQ9NP71 852 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 DSG3P32926 999 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 DPYDQ12882 1025 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 STXBP2Q15833 593 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 VSIG1Q86XK7 387 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 MFN1Q8IWA4 741 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 NACC1Q96RE7 527 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 MAGEF1Q9HAY2 307 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 GBA2Q9HCG7 927 aaPredicted RBP17.15■□□□□ 0.34
PKP4-205ENST00000426248 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
PKP4-205ENST00000426248 SCNN1BP51168 640 aa17.15■□□□□ 0.34
PKP4-205ENST00000426248 ALDH5A1P51649 535 aaPredicted RBP17.15■□□□□ 0.34
PKP4-205ENST00000426248 ZNF157P51786 506 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms