RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 COL4A3BPQ9Y5P4 624 aa14.5□□□□□ -0.09
VRK3-203ENST00000424804 SLITRK3O94933 977 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 CTSAP10619 480 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 GCFC2P16383 781 aaKnown RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 EPCAMP16422 314 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 ALDH7A1P49419 539 aaKnown RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 SIGLEC14Q08ET2 396 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 LAMTOR4Q0VGL1 99 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 TCF15Q12870 199 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 GNL2Q13823 731 aaKnown RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 SAFBQ15424 915 aaKnown RBP eCLIP14.49□□□□□ -0.09
VRK3-203ENST00000424804 PTPN21Q16825 1174 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 CATSPER4Q7RTX7 472 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 DIS3L2Q8IYB7 885 aaKnown RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 C12orf76Q8N812 135 aaPredicted RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 SMG8Q8ND04 991 aaKnown RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 PBXIP1Q96AQ6 731 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 DYDC2Q96IM9 177 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 C8orf76Q96K31 380 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 CEP170P1Q96L14 293 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 INO80BQ9C086 356 aaPredicted RBP14.49□□□□□ -0.09
VRK3-203ENST00000424804 PCDHB2Q9Y5E7 798 aa14.49□□□□□ -0.09
VRK3-203ENST00000424804 DENND4AQ7Z401 1863 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 MYO15AQ9UKN7 3530 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 BTBD18B2RXH4 712 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 C2CD4DB7Z1M9 353 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 ZC3H11AO75152 810 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-203ENST00000424804 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 SRGAP2CP0DJJ0 459 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 SKIP12755 728 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 MRE11P49959 708 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 POLGP54098 1239 aaPredicted RBP14.48□□□□□ -0.09
VRK3-203ENST00000424804 CTTNQ14247 550 aaKnown RBP14.48□□□□□ -0.09
VRK3-203ENST00000424804 SRGAP1Q7Z6B7 1085 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 FERMT3Q86UX7 667 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 RSPH1Q8WYR4 309 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 TMEM169Q96HH4 297 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 JPH2Q9BR39 696 aaPredicted RBP14.48□□□□□ -0.09
VRK3-203ENST00000424804 LLPHQ9BRT6 129 aaKnown RBP14.48□□□□□ -0.09
VRK3-203ENST00000424804 LXNQ9BS40 222 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 MIOSQ9NXC5 875 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 PPME1Q9Y570 386 aa14.48□□□□□ -0.09
VRK3-203ENST00000424804 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 INPPL1O15357 1258 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 CD2BP2O95400 341 aaKnown RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 PDGFBP01127 241 aaPredicted RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 SP100P23497 879 aaPredicted RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 YWHABP31946 246 aaKnown RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 RFC5P40937 340 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 RAB27AP51159 221 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 VCPP55072 806 aaKnown RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 ITIH3Q06033 890 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 PTPN14Q15678 1187 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 AMHR2Q16671 573 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 GLB1LQ6UWU2 654 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 IFNLR1Q8IU57 520 aaPredicted RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 FBXL6Q8N531 539 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 BACH2Q9BYV9 841 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 SMOC2Q9H3U7 446 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
VRK3-203ENST00000424804 INPP5FQ9Y2H2 1132 aa14.47□□□□□ -0.09
VRK3-203ENST00000424804 LYPLA2O95372 231 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 SRGAP2BP0DMP2 458 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 NCLP19338 710 aaKnown RBP14.46□□□□□ -0.09
VRK3-203ENST00000424804 PTENP60484 403 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 EMC2Q15006 297 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 TPRNQ4KMQ1 711 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 TAS1R1Q7RTX1 841 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 RNF168Q8IYW5 571 aaPredicted RBP14.46□□□□□ -0.09
VRK3-203ENST00000424804 PSPC1Q8WXF1 523 aaKnown RBP14.46□□□□□ -0.09
VRK3-203ENST00000424804 SLC7A3Q8WY07 619 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 TMX3Q96JJ7 454 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 KLHL5Q96PQ7 755 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 EIF2AQ9BY44 585 aaKnown RBP14.46□□□□□ -0.09
VRK3-203ENST00000424804 ZSWIM4Q9H7M6 989 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 MARCH5Q9NX47 278 aa14.46□□□□□ -0.09
VRK3-203ENST00000424804 A0A087WWV3 80 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.45□□□□□ -0.1
VRK3-203ENST00000424804 NRP1O14786 923 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 ASAP2O43150 1006 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 TSPAN1O60635 241 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 DKC1O60832 514 aaKnown RBP eCLIP14.45□□□□□ -0.1
VRK3-203ENST00000424804 BRD1O95696 1058 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 ARL2P36404 184 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 PLXNA3P51805 1871 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 CYP4A11Q02928 519 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 XKR9Q5GH70 373 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 RARS2Q5T160 578 aaKnown RBP14.45□□□□□ -0.1
VRK3-203ENST00000424804 NCAPH2Q6IBW4 605 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 KIAA1841Q6NSI8 718 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 COLGALT2Q8IYK4 626 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 KREMEN2Q8NCW0 462 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 ASAP3Q8TDY4 903 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 PGBD4Q96DM1 585 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms