RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SNX17Q15036 470 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 TPD52L1Q16890 204 aaPredicted RBP14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CENPPQ6IPU0 288 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 TMEM130Q8N3G9 435 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CSGALNACT2Q8N6G5 542 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CEP120Q8N960 986 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 CCDC113Q9H0I3 377 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 C11orf49Q9H6J7 331 aa14.75□□□□□ -0.05
PRPF39-202ENST00000424478 SCN5AQ14524 2016 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 GAS2O43903 313 aaKnown RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 CKBP12277 381 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 MRPS6P82932 125 aaKnown RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 MBTPS1Q14703 1052 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 CEP135Q66GS9 1140 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 SESTD1Q86VW0 696 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 PRDM5Q9NQX1 630 aaPredicted RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 AGPAT3Q9NRZ7 376 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 PHKA2P46019 1235 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 MYL5Q02045 173 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 STRN3Q13033 797 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 TFDP1Q14186 410 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 MAPK6Q16659 721 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 TRIM71Q2Q1W2 868 aaKnown RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 ZCWPW2Q504Y3 356 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 CDCA2Q69YH5 1023 aaPredicted RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 MAP4K3Q8IVH8 894 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 ACCSQ96QU6 501 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 CELF4Q9BZC1 486 aaKnown RBP14.74□□□□□ -0.05
PRPF39-202ENST00000424478 GBP3Q9H0R5 595 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 C17orf75Q9HAS0 396 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 RWDD2AQ9UIY3 292 aa14.74□□□□□ -0.05
PRPF39-202ENST00000424478 CCDC85CA6NKD9 419 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 NR2F2P24468 414 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 CYP2C18P33260 490 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 LIG4P49917 911 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 FAAP100Q0VG06 881 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 TAF2Q6P1X5 1199 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 TCHPQ9BT92 498 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 NAT10Q9H0A0 1025 aaKnown RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 PPME1Q9Y570 386 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 ARF4P18085 180 aaPredicted RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 CD52P31358 61 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 AMHR2Q16671 573 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 CATSPER4Q7RTX7 472 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 EXOC8Q8IYI6 725 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 DHTKD1Q96HY7 919 aaPredicted RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 HES2Q9Y543 173 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 EIF3DO15371 548 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 DARSP14868 501 aaKnown RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 EIF4BP23588 611 aaKnown RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 ITGB8P26012 769 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 ACOT2P49753 483 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 PRPF4BQ13523 1007 aaKnown RBP14.73□□□□□ -0.05
PRPF39-202ENST00000424478 IRF2BP1Q8IU81 584 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 TMEM192Q8IY95 271 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 DACH1Q9UI36 760 aa14.73□□□□□ -0.05
PRPF39-202ENST00000424478 TSPAN1O60635 241 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 NR3C1P04150 777 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 PTK7Q13308 1070 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 BMT2Q1RMZ1 405 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 FAM228AQ86W67 206 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 POMGNT1Q8WZA1 660 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 TNRC18O15417 2968 aaPredicted RBP14.72□□□□□ -0.05
PRPF39-202ENST00000424478 ERLIN2O94905 339 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 CD4P01730 458 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 TNFSF9P41273 254 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 ADAM9Q13443 819 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 ARMCX5Q6P1M9 558 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 LRRC55Q6ZSA7 311 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 NECAB2Q7Z6G3 386 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 GCOM2Q9BZD3 368 aaPredicted RBP14.72□□□□□ -0.05
PRPF39-202ENST00000424478 CXCL16Q9H2A7 254 aa14.72□□□□□ -0.05
PRPF39-202ENST00000424478 TYW1Q9NV66 732 aaKnown RBP14.72□□□□□ -0.05
PRPF39-202ENST00000424478 PIN4Q9Y237 131 aaKnown RBP14.72□□□□□ -0.05
PRPF39-202ENST00000424478 PHLPP2Q6ZVD8 1323 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 GOLGA6L3A6NEY3 463 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 GOLGA6L19H0YKK7 550 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 ASAP2O43150 1006 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 AKAP3O75969 853 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 ERCC5P28715 1186 aaPredicted RBP14.71□□□□□ -0.05
PRPF39-202ENST00000424478 MGAT3Q09327 533 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 THNSL1Q8IYQ7 743 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 EIF2AQ9BY44 585 aaKnown RBP14.71□□□□□ -0.05
PRPF39-202ENST00000424478 FZD8Q9H461 694 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 MMRN2Q9H8L6 949 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 TRPV2Q9Y5S1 764 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 M0QZ92 97 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 WNT7BP56706 349 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 SPATA1Q5VX52 437 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 TRAF7Q6Q0C0 670 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 DEFB128Q7Z7B8 93 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 CBWD2Q8IUF1 395 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 ENOX1Q8TC92 643 aaKnown RBP14.71□□□□□ -0.05
PRPF39-202ENST00000424478 ABHD8Q96I13 439 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 APOL6Q9BWW8 343 aa14.71□□□□□ -0.05
PRPF39-202ENST00000424478 HOXA11P31270 313 aaPredicted RBP14.71□□□□□ -0.06
PRPF39-202ENST00000424478 SPAG1Q07617 926 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms