RNA–Protein interactions for RNA: ENST00000424337.6

GTF2IRD1-202, Transcript of GTF2I repeat domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-202ENST00000424337 TBK1Q9UHD2 729 aa15.05■□□□□ -0
GTF2IRD1-202ENST00000424337 UBR3Q6ZT12 1888 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 MYH3P11055 1940 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 TFAP4Q01664 338 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 TNFAIP8L3Q5GJ75 292 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 DPP8Q6V1X1 898 aaPredicted RBP15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 CROCCP2Q86T23 111 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 RBM41Q96IZ5 413 aaKnown RBP15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 PITPNM3Q9BZ71 974 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 DUOX1Q9NRD9 1551 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 SMCO2A6NFE2 343 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 BRAFP15056 766 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 PRDX5P30044 214 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 ALG3Q92685 438 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 TBC1D10AQ9BXI6 508 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 POLLQ9UGP5 575 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 AJAP1Q9UKB5 411 aaPredicted RBP15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 PFASO15067 1338 aa15.04■□□□□ -0
GTF2IRD1-202ENST00000424337 ABLIM1O14639 778 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DHX34Q14147 1143 aaKnown RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SETDB1Q15047 1291 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 CALCRLQ16602 461 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 EXOC3L4Q17RC7 722 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 LRRC23Q53EV4 343 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DCAF17Q5H9S7 520 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TCERG1LQ5VWI1 586 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 OR52E8Q6IFG1 317 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 FAM81AQ8TBF8 368 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 NAP1L3Q99457 506 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 KIAA1683Q9H0B3 1180 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DBNDD1Q9H9R9 158 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DNAJC17Q9NVM6 304 aaKnown RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 ANKRD63C9JTQ0 380 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 GFPT2O94808 682 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SKIV2L2P42285 1042 aaKnown RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 RCN2Q14257 317 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 LLGL1Q15334 1064 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 FOXB2Q5VYV0 432 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 KRT25Q7Z3Z0 450 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TRIM74Q86UV6 250 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TRIM73Q86UV7 250 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 GLYCTKQ8IVS8 523 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SH3RF3Q8TEJ3 882 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 GJA10Q969M2 543 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 CEP63Q96MT8 703 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TMEM109Q9BVC6 243 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 MAD2L2Q9UI95 211 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SCOCQ9UIL1 159 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TTC7AQ9ULT0 858 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 NPHP3-ACAD11A0A0J9YXS1 232 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 E7ENQ6 273 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 GNA14O95837 355 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 PYGBP11216 843 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 RARGP13631 454 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 NPR1P16066 1061 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 ACADSP16219 412 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 PON1P27169 355 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 RNF43Q68DV7 783 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DAGLBQ8NCG7 672 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 MXD3Q9BW11 206 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 LRMDAQ9H2I8 198 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 DENND2DQ9H6A0 471 aaPredicted RBP15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 TMEM260Q9NX78 707 aa15.03■□□□□ -0
GTF2IRD1-202ENST00000424337 SMAPO00193 183 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 BBOX1O75936 387 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 PCP11498 1178 aaKnown RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 PTGIRP43119 386 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 DRG2P55039 364 aaKnown RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 CCDC6Q16204 474 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 ECM1Q16610 540 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 PARP6Q2NL67 630 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 CRY2Q49AN0 593 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 HERC4Q5GLZ8 1057 aaPredicted RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 KRT79Q5XKE5 535 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 GALNT17Q6IS24 598 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 APBB1IPQ7Z5R6 666 aaPredicted RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 CCNJLQ8IV13 435 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 RBBP8NLQ8NC74 664 aaPredicted RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 IL17RBQ9NRM6 502 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 NMRK1Q9NWW6 199 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 IGSF9BQ9UPX0 1349 aa15.02■□□□□ -0
GTF2IRD1-202ENST00000424337 USP17L3A6NCW0 530 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 USP17L4A6NCW7 530 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 NVLO15381 856 aaKnown RBP15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 CBX6O95503 412 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 NR2F2P24468 414 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 KCNJ1P48048 391 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 PPP2R5EQ16537 467 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 MFSD5Q6N075 450 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 TTC27Q6P3X3 843 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 USP17L1Q7RTZ2 530 aa15.02□□□□□ -0.01
GTF2IRD1-202ENST00000424337 AGGF1Q8N302 714 aaeCLIP15.02□□□□□ -0.011e-7■■■■■ 27.7
GTF2IRD1-202ENST00000424337 DNAJC19Q96DA6 116 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms