RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
C9orf3-204ENST00000424143 THAP2Q9H0W7 228 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 LRRC19Q9H756 370 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 COG5Q9UP83 839 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
C9orf3-204ENST00000424143 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 SLITRK3O94933 977 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 ATP6V1G2O95670 118 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 MAN1A1P33908 653 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 COILP38432 576 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-204ENST00000424143 RPL21P46778 160 aaKnown RBP16.4■□□□□ 0.22
C9orf3-204ENST00000424143 CAV1Q03135 178 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 BFSP1Q12934 665 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 AUHQ13825 339 aaKnown RBP16.4■□□□□ 0.22
C9orf3-204ENST00000424143 CRYMQ14894 314 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 CNGA2Q16280 664 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 INTS8Q75QN2 995 aaKnown RBP16.4■□□□□ 0.22
C9orf3-204ENST00000424143 OTOP1Q7RTM1 612 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 LRRC34Q8IZ02 419 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 MAIP1Q8WWC4 291 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 GLG1Q92896 1179 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 EBF2Q9HAK2 575 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 KCNQ5Q9NR82 932 aa16.4■□□□□ 0.22
C9orf3-204ENST00000424143 SNX3O60493 162 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 PSMD10O75832 226 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
C9orf3-204ENST00000424143 FKBP1AP62942 108 aaKnown RBP16.39■□□□□ 0.21
C9orf3-204ENST00000424143 GTF2IP78347 998 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.21
C9orf3-204ENST00000424143 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 CDC42EP5Q6NZY7 148 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
C9orf3-204ENST00000424143 FOXN3O00409 490 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-204ENST00000424143 EML1O00423 815 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 CYP1A2P05177 515 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 KCNA1Q09470 495 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 CBWD6Q4V339 395 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 CBWD3Q5JTY5 395 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 CBWD5Q5RIA9 395 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 PHLDB3Q6NSJ2 640 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 APOBEC3HQ6NTF7 200 aaKnown RBP16.38■□□□□ 0.21
C9orf3-204ENST00000424143 TMEM179Q6ZVK1 233 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 SLC13A5Q86YT5 568 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-204ENST00000424143 MAB21L3Q8N8X9 362 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-204ENST00000424143 ANKRD27Q96NW4 1050 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 IDI2Q9BXS1 227 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 SEMA4AQ9H3S1 761 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 NOD2Q9HC29 1040 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 BATF3Q9NR55 127 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 UVRAGQ9P2Y5 699 aa16.38■□□□□ 0.21
C9orf3-204ENST00000424143 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 FTLP02792 175 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 KRT13P13646 458 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ITIH2P19823 946 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 SKIV2L2P42285 1042 aaKnown RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 PRELPP51888 382 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 KCNQ4P56696 695 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ENPEPQ07075 957 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 SIX1Q15475 284 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 EPC2Q52LR7 807 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 CCDC137Q6PK04 289 aaKnown RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 B3GNT9Q6UX72 402 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 SIAH1Q8IUQ4 282 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 FAM178BQ8IXR5 827 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 TEKT1Q969V4 418 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 SELENOSQ9BQE4 189 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 PLVAPQ9BX97 442 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 TRIM31Q9BZY9 425 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 TMEM206Q9H813 350 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 LRRC4CQ9HCJ2 640 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 CTTNBP2NLQ9P2B4 639 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 USP15Q9Y4E8 981 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ACTL7BQ9Y614 415 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 FSCN2O14926 492 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 GJB6O95452 261 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ABCB4P21439 1286 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 IFI35P80217 286 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 CERKLQ49MI3 558 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 RHBDF2Q6PJF5 856 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 RELL1Q8IUW5 271 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 FAM71AQ8IYT1 594 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 CERS5Q8N5B7 392 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 GRAMD1AQ96CP6 724 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 ST6GALNAC4Q9H4F1 302 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms