RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 POLR3FQ9H1D9 316 aaPredicted RBP16.89■□□□□ 0.29
USB1-202ENST00000423271 NRDE2Q9H7Z3 1164 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 C11orf16Q9NQ32 467 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 PRKAG3Q9UGI9 489 aa16.89■□□□□ 0.29
USB1-202ENST00000423271 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 ERLIN2O94905 339 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 ALDH7A1P49419 539 aaKnown RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 MBTD1Q05BQ5 628 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 COASYQ13057 564 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 ORC2Q13416 577 aaPredicted RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 TFDP1Q14186 410 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 MRPL10Q7Z7H8 261 aaKnown RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 PGBD4Q96DM1 585 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 CDCA3Q99618 268 aaPredicted RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 EIF2AQ9BY44 585 aaKnown RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 GBP3Q9H0R5 595 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 NGRNQ9NPE2 291 aaKnown RBP16.88■□□□□ 0.29
USB1-202ENST00000423271 DNAJB4Q9UDY4 337 aa16.88■□□□□ 0.29
USB1-202ENST00000423271 SLC11A1P49279 550 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 KCNC3Q14003 757 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 AMHR2Q16671 573 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 LLGL2Q6P1M3 1020 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 MAEAQ7L5Y9 396 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 ZNF280BQ86YH2 543 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 C4orf32Q8N8J7 132 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 TMEM169Q96HH4 297 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 LRFN3Q9BTN0 628 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 POLR3CQ9BUI4 534 aaPredicted RBP16.87■□□□□ 0.29
USB1-202ENST00000423271 RSAD1Q9HA92 442 aa16.87■□□□□ 0.29
USB1-202ENST00000423271 USP15Q9Y4E8 981 aaPredicted RBP16.87■□□□□ 0.29
USB1-202ENST00000423271 C2orf71A6NGG8 1288 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 B4GALT5O43286 388 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 GALTP07902 379 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 XRCC6P12956 609 aaKnown RBP eCLIP16.86■□□□□ 0.29
USB1-202ENST00000423271 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
USB1-202ENST00000423271 U2AF2P26368 475 aaKnown RBP eCLIP16.86■□□□□ 0.29
USB1-202ENST00000423271 TRAPPC10P48553 1259 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
USB1-202ENST00000423271 RNASELQ05823 741 aaKnown RBP16.86■□□□□ 0.29
USB1-202ENST00000423271 POU5F1BQ06416 359 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 SMC1AQ14683 1233 aaKnown RBP16.86■□□□□ 0.29
USB1-202ENST00000423271 URGCPQ8TCY9 931 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 AUTS2Q8WXX7 1259 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 IGSF21Q96ID5 467 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
USB1-202ENST00000423271 HES2Q9Y543 173 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 IPPQ9Y573 584 aa16.86■□□□□ 0.29
USB1-202ENST00000423271 DDHD2O94830 711 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 POMCP01189 267 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 ARF4P18085 180 aaPredicted RBP16.85■□□□□ 0.29
USB1-202ENST00000423271 RPA1P27694 616 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 CA8P35219 290 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 ECM1Q16610 540 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 TMEM31Q5JXX7 168 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 NOTUMQ6P988 496 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 CDR2LQ86X02 465 aaPredicted RBP16.85■□□□□ 0.29
USB1-202ENST00000423271 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 MRPL43Q8N983 215 aaKnown RBP16.85■□□□□ 0.29
USB1-202ENST00000423271 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 NACC1Q96RE7 527 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 APOL5Q9BWW9 433 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 VN1R3Q9BXE9 311 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 NFKBIZQ9BYH8 718 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 ZBP1Q9H171 429 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 DBR1Q9UK59 544 aaKnown RBP16.85■□□□□ 0.29
USB1-202ENST00000423271 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 CNTNAP2Q9UHC6 1331 aa16.85■□□□□ 0.29
USB1-202ENST00000423271 FSD2A1L4K1 749 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 LRRIQ4A6NIV6 560 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 ITGA4P13612 1032 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 AXLP30530 894 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
USB1-202ENST00000423271 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
USB1-202ENST00000423271 ANKRD54Q6NXT1 300 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 SYCE2Q6PIF2 218 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 TMEM184AQ6ZMB5 413 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 CCDC51Q96ER9 411 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
USB1-202ENST00000423271 APOL6Q9BWW8 343 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 CSRNP2Q9H175 543 aa16.84■□□□□ 0.29
USB1-202ENST00000423271 NXF3Q9H4D5 531 aaKnown RBP16.84■□□□□ 0.29
USB1-202ENST00000423271 TRIOO75962 3097 aa16.83■□□□□ 0.29
USB1-202ENST00000423271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.83■□□□□ 0.28
USB1-202ENST00000423271 DCXO43602 365 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 CLASP2O75122 1294 aaKnown RBP16.83■□□□□ 0.28
USB1-202ENST00000423271 CXCL14O95715 111 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 CCT6AP40227 531 aaKnown RBP16.83■□□□□ 0.28
USB1-202ENST00000423271 MLH1P40692 756 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms