RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 MFSD14AQ96MC6 490 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 RSAD1Q9HA92 442 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 PCDHA12Q9UN75 941 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 NEMFO60524 1076 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 ERLIN2O94905 339 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 SLITRK3O94933 977 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 HOXA11P31270 313 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-206ENST00000423161 SLC11A1P49279 550 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 ZXDAP98168 799 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 TRIM29Q14134 588 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 UBXN11Q5T124 520 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 TRIM67Q6ZTA4 783 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 MRPL10Q7Z7H8 261 aaKnown RBP20.6■□□□□ 0.89
SREBF1-206ENST00000423161 TMEM87AQ8NBN3 555 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 TTC12Q9H892 705 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-206ENST00000423161 XPNPEP1Q9NQW7 623 aa20.6■□□□□ 0.89
SREBF1-206ENST00000423161 TMEM221A6NGB7 291 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 M0R296 226 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 WNT7AO00755 349 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 B4GALT3O60512 393 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 CTSAP10619 480 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 SP100P23497 879 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-206ENST00000423161 GIT2Q14161 759 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 MXD4Q14582 209 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-206ENST00000423161 CES5AQ6NT32 575 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 ZNF280BQ86YH2 543 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 CCDC43Q96MW1 224 aaKnown RBP20.59■□□□□ 0.89
SREBF1-206ENST00000423161 CDH22Q9UJ99 828 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 IRAK3Q9Y616 596 aa20.59■□□□□ 0.89
SREBF1-206ENST00000423161 DENND4AQ7Z401 1863 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 KMT2EQ8IZD2 1858 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.89
SREBF1-206ENST00000423161 LYPLA2O95372 231 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 NCLP19338 710 aaKnown RBP20.58■□□□□ 0.89
SREBF1-206ENST00000423161 TXKP42681 527 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 PTENP60484 403 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 ITIH3Q06033 890 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 FAM193BQ96PV7 902 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-206ENST00000423161 HSD17B14Q9BPX1 270 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 KCNH6Q9H252 994 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 ADAM7Q9H2U9 754 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 ANKEF1Q9NU02 776 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 KANSL3Q9P2N6 904 aa20.58■□□□□ 0.89
SREBF1-206ENST00000423161 WDFY4Q6ZS81 3184 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 ZDBF2Q9HCK1 2354 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 PIEZO1Q92508 2521 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 TSPAN1O60635 241 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 DDHD2O94830 711 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 AXLP30530 894 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 AFF1P51825 1210 aaKnown RBP20.57■□□□□ 0.88
SREBF1-206ENST00000423161 TFDP1Q14186 410 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 PCBP1Q15365 356 aaKnown RBP eCLIP20.57■□□□□ 0.887e-11■■■■□ 19.9
SREBF1-206ENST00000423161 BMP8AQ7Z5Y6 402 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 CNNM3Q8NE01 707 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 FBXL18Q96ME1 805 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 VN1R3Q9BXE9 311 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 POMKQ9H5K3 350 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 DZANK1Q9NVP4 752 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 NR2E1Q9Y466 385 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 C2orf16Q68DN1 1984 aa20.57■□□□□ 0.88
SREBF1-206ENST00000423161 INO80B-WBP1J3KQ70 363 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 DGAT1O75907 488 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 POMCP01189 267 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 ITGA4P13612 1032 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 EPCAMP16422 314 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 ST3GAL1Q11201 340 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 CAPSQ13938 189 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 PTPN21Q16825 1174 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 RARS2Q5T160 578 aaKnown RBP20.56■□□□□ 0.88
SREBF1-206ENST00000423161 NOTUMQ6P988 496 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 SMG8Q8ND04 991 aaKnown RBP20.56■□□□□ 0.88
SREBF1-206ENST00000423161 ASAP3Q8TDY4 903 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 PBXIP1Q96AQ6 731 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 CPB2Q96IY4 423 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 NECTIN4Q96NY8 510 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 MTMR9Q96QG7 549 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 TMEM175Q9BSA9 504 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 EIF2AQ9BY44 585 aaKnown RBP20.56■□□□□ 0.88
SREBF1-206ENST00000423161 UBN1Q9NPG3 1134 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 IPPQ9Y573 584 aa20.56■□□□□ 0.88
SREBF1-206ENST00000423161 POTEMA6NI47 508 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 MTHFRP42898 656 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 RARRES1P49788 294 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 POU5F1BQ06416 359 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 SIGLEC14Q08ET2 396 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 NCBP1Q09161 790 aaKnown RBP20.55■□□□□ 0.88
SREBF1-206ENST00000423161 PTPN14Q15678 1187 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 ZBTB33Q86T24 672 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 IFNLR1Q8IU57 520 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-206ENST00000423161 C12orf76Q8N812 135 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-206ENST00000423161 PIGOQ8TEQ8 1089 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 CCDC51Q96ER9 411 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 RIPOR3Q96MK2 946 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 STK39Q9UEW8 545 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 PLXNA3P51805 1871 aa20.55■□□□□ 0.88
SREBF1-206ENST00000423161 NRP1O14786 923 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms