RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 PRB1P04280 392 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 CSRP1P21291 193 aaKnown RBP13.6□□□□□ -0.23
UFD1-203ENST00000421968 MPLP40238 635 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 NOMO2Q5JPE7 1267 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 MIER1Q8N108 512 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 SPEM1Q8N4L4 309 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 MTMR8Q96EF0 704 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
UFD1-203ENST00000421968 PCDHGA5Q9Y5G8 931 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 LAMA1P25391 3075 aa13.6□□□□□ -0.23
UFD1-203ENST00000421968 PCNX2A6NKB5 2137 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 K7ESF4 209 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 TGM5O43548 720 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 HBP1O60381 514 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 PLA2G2AP14555 144 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 RAP1GAPP47736 663 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 HAND2P61296 217 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 GAS6Q14393 721 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 ALX1Q15699 326 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 CACNA2D4Q7Z3S7 1137 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 SIRT2Q8IXJ6 389 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 FAM3CQ92520 227 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 LPPQ93052 612 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 DACT1Q9NYF0 836 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
UFD1-203ENST00000421968 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 B4GALT3O60512 393 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 ZMYND10O75800 440 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 FGAP02671 866 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 CAPNS1P04632 268 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 ITGB5P18084 799 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 GLUD2P49448 558 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 MTMR1Q13613 665 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 KBTBD6Q86V97 674 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 WDR5BQ86VZ2 330 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 ITFG1Q8TB96 612 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 ESR2Q92731 530 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 HERC2P3Q9BVR0 1158 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
UFD1-203ENST00000421968 ECI2O75521 394 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 PAPSS2O95340 614 aaPredicted RBP13.57□□□□□ -0.24
UFD1-203ENST00000421968 ALDH2P05091 517 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
UFD1-203ENST00000421968 NLRP11P59045 1033 aaKnown RBP13.57□□□□□ -0.24
UFD1-203ENST00000421968 ACTR2P61160 394 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 FGD1P98174 961 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 CCDC178Q5BJE1 867 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 IQCA1Q86XH1 822 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 PIGSQ96S52 555 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 ASCC3Q8N3C0 2202 aaKnown RBP13.57□□□□□ -0.24
UFD1-203ENST00000421968 KALRNO60229 2985 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 COL1A2P08123 1366 aa13.57□□□□□ -0.24
UFD1-203ENST00000421968 OFD1O75665 1012 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 RPP40O75818 363 aaKnown RBP13.56□□□□□ -0.24
UFD1-203ENST00000421968 DDHD2O94830 711 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 CHRNB1P11230 501 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
UFD1-203ENST00000421968 FGFR4P22455 802 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 PHKA2P46019 1235 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 SLC26A2P50443 739 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 ZNF605Q86T29 641 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 GAB3Q8WWW8 586 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 ZNF668Q96K58 619 aaPredicted RBP13.56□□□□□ -0.24
UFD1-203ENST00000421968 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
UFD1-203ENST00000421968 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 AKT3Q9Y243 479 aa13.56□□□□□ -0.24
UFD1-203ENST00000421968 URB1O60287 2271 aaKnown RBP13.56□□□□□ -0.24
UFD1-203ENST00000421968 SHROOM3Q8TF72 1996 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 MEIS3P2A8K0S8 358 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 NRP1O14786 923 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 C22orf31O95567 290 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 C1RP00736 705 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 CCDC192P0DO97 292 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 HOXC13P31276 330 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 SCAPQ12770 1279 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 NPAS3Q8IXF0 933 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 CUL5Q93034 780 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 RAI2Q9Y5P3 530 aa13.55□□□□□ -0.24
UFD1-203ENST00000421968 ZBTB42B2RXF5 422 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 BACH1O14867 736 aa13.54□□□□□ -0.24
UFD1-203ENST00000421968 C1QL1O75973 258 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms