RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CDCA5Q96FF9 252 aa6.43□□□□□ -1.38
SFXN1-202ENST00000421887 PLEKHG4BQ96PX9 1271 aa6.43□□□□□ -1.38
SFXN1-202ENST00000421887 GGA3Q9NZ52 723 aa6.43□□□□□ -1.38
SFXN1-202ENST00000421887 TMEFF2Q9UIK5 374 aaPredicted RBP6.43□□□□□ -1.38
SFXN1-202ENST00000421887 USP16Q9Y5T5 823 aa6.43□□□□□ -1.38
SFXN1-202ENST00000421887 SLC4A7Q9Y6M7 1214 aa6.43□□□□□ -1.38
SFXN1-202ENST00000421887 SIPA1L3O60292 1781 aaPredicted RBP6.42□□□□□ -1.38
SFXN1-202ENST00000421887 PSMD14O00487 310 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 KLHL18O94889 574 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 SNRPA1P09661 255 aaKnown RBP6.42□□□□□ -1.38
SFXN1-202ENST00000421887 COL6A1P12109 1028 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 LMO1P25800 156 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 NF2P35240 595 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 STEAP3Q658P3 488 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 KIF6Q6ZMV9 814 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 Q6ZUG5 572 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 OTOP1Q7RTM1 612 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 NLRP10Q86W26 655 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 ERO1AQ96HE7 468 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 RTFDC1Q9BY42 306 aaPredicted RBP6.42□□□□□ -1.38
SFXN1-202ENST00000421887 APEX2Q9UBZ4 518 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 MKI67P46013 3256 aaKnown RBP6.42□□□□□ -1.38
SFXN1-202ENST00000421887 ABCC12Q96J65 1359 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 RIC1Q4ADV7 1423 aa6.42□□□□□ -1.38
SFXN1-202ENST00000421887 E9PSI1 815 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 MYO1BO43795 1136 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 BBOX1O75936 387 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 C1SP09871 688 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 ACO1P21399 889 aaKnown RBP6.41□□□□□ -1.38
SFXN1-202ENST00000421887 ARHGEF6Q15052 776 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 HLFQ16534 295 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 IQCEQ6IPM2 695 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 DPY19L2P1Q6NXN4 242 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 PPP1R42Q7Z4L9 355 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 FUKQ8N0W3 1084 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 NGEFQ8N5V2 710 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 FRS2Q8WU20 508 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 KLHL6Q8WZ60 621 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 ZNF428Q96B54 188 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 CHAMP1Q96JM3 812 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 PTPN22Q9Y2R2 807 aa6.41□□□□□ -1.38
SFXN1-202ENST00000421887 DDX60Q8IY21 1712 aaKnown RBP6.41□□□□□ -1.38
SFXN1-202ENST00000421887 YDJCA8MPS7 323 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 UBE2Q2LH0YL09 131 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 GPTP24298 496 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 GTF2A2P52657 109 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 SLC9C1Q4G0N8 1177 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 OTUD7BQ6GQQ9 843 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 POMZP3Q6PJE2 187 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 CRACR2BQ8N4Y2 399 aaPredicted RBP6.4□□□□□ -1.38
SFXN1-202ENST00000421887 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 ARMC5Q96C12 935 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 DBNDD1Q9H9R9 158 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 EMC9Q9Y3B6 208 aa6.4□□□□□ -1.38
SFXN1-202ENST00000421887 IBTKQ9P2D0 1353 aaPredicted RBP6.4□□□□□ -1.39
SFXN1-202ENST00000421887 CEP290O15078 2479 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 SZT2Q5T011 3432 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 A0A1W2PQH9 124 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ANKRD34BA5PLL1 514 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ERVV-1B6SEH8 477 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 NOP56O00567 594 aaKnown RBP6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ADH4P08319 380 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 SMAD2Q15796 467 aaKnown RBP6.39□□□□□ -1.39
SFXN1-202ENST00000421887 PPP2R5EQ16537 467 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 GTF2IRD2BQ6EKJ0 949 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 KIAA1211LQ6NV74 962 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 MOB2Q70IA6 237 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ARMC9Q7Z3E5 817 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 GTF2IRD2Q86UP8 949 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 Q8N1Y9 231 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 BVESQ8NE79 360 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 IL17REQ8NFR9 667 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 DIO2Q92813 273 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
SFXN1-202ENST00000421887 NAF1Q96HR8 494 aaKnown RBP6.39□□□□□ -1.39
SFXN1-202ENST00000421887 HTATIP2Q9BUP3 242 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 NR2E3Q9Y5X4 410 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ABCC4O15439 1325 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 ANKRD36CQ5JPF3 1778 aa6.39□□□□□ -1.39
SFXN1-202ENST00000421887 A0A1W2PPC1 479 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 MANSC4A6NHS7 340 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-202ENST00000421887 KCNQ3O43525 872 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 ECE2O60344 883 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 DIAPH1O60610 1272 aaKnown RBP6.38□□□□□ -1.39
SFXN1-202ENST00000421887 TADA3O75528 432 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 FBXO21O94952 628 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 CSF2RBP32927 897 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF568Q3ZCX4 644 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 SUSD4Q5VX71 490 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 VASNQ6EMK4 673 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 LDLRAD3Q86YD5 345 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF513Q8N8E2 541 aaPredicted RBP6.38□□□□□ -1.39
SFXN1-202ENST00000421887 CD99L2Q8TCZ2 262 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 RTF1Q92541 710 aaKnown RBP6.38□□□□□ -1.39
SFXN1-202ENST00000421887 ZNF333Q96JL9 665 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 EYA3Q99504 573 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 R3HDMLQ9H3Y0 253 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
SFXN1-202ENST00000421887 CYP26B1Q9NR63 512 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms