RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 KRIT1O00522 736 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 KIF11P52732 1056 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 CNNM4Q6P4Q7 775 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP17L6PQ6QN14 398 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 TTC16Q8NEE8 873 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 CNGB3Q9NQW8 809 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 SH3BP1Q9Y3L3 701 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 PCDHA13Q9Y5I0 950 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 PDE5AO76074 875 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 MMEP08473 750 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 PECAM1P16284 738 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 MRPS35P82673 323 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 USP50Q70EL3 339 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 DAGLBQ8NCG7 672 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 CASP10Q92851 521 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 AP1M1Q9BXS5 423 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 TXLNGQ9NUQ3 528 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 HMGB1P1B2RPK0 211 aaPredicted RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 SMAPO00193 183 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 ECEL1O95672 775 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 OSBPP22059 807 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 MAP3K7CLP57077 242 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 DHX9Q08211 1270 aaKnown RBP10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 SFMBT2Q5VUG0 894 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 OTUD6AQ7L8S5 288 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 C2orf69Q8N8R5 385 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 C3orf20Q8ND61 904 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 ZNF653Q96CK0 615 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 MIS12Q9H081 205 aa10.07□□□□□ -0.8
SEMA4D-207ENST00000420987 NID2Q14112 1375 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 MAN1A2O60476 641 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 MGEA5O60502 916 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 PLEKP08567 350 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ABCB4P21439 1286 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 IRX4P78413 519 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 KIF22Q14807 665 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 KCTD21Q4G0X4 260 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ARHGEF16Q5VV41 709 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 CROCCP2Q86T23 111 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 P2RX5Q93086 422 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 DDX28Q9NUL7 540 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 TMEM260Q9NX78 707 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 TMCC1O94876 653 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ZBED6P86452 979 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 BTKQ06187 659 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 GFPT1Q06210 699 aaPredicted RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 LDHDQ86WU2 507 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ANKRD13AQ8IZ07 590 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ECT2Q9H8V3 914 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 COL4A1P02462 1669 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 LGALS16A8MUM7 142 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 DDX39AO00148 427 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 CYTH3O43739 400 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ATP6V1G1O75348 118 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 PLCG1P19174 1290 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 MAGOHP61326 146 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 LRRC36Q1X8D7 754 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 ANKRD35Q8N283 1001 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 MAGOHBQ96A72 148 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 DMGDHQ9UI17 866 aaKnown RBP10.06□□□□□ -0.8
SEMA4D-207ENST00000420987 BAZ2AQ9UIF9 1905 aaKnown RBP10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 ZNF18P17022 549 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 LSP1P33241 339 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 SMTNP53814 917 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 CLUL1Q15846 466 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 ASIC2Q16515 512 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 CCNI2Q6ZMN8 369 aaPredicted RBP10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 PEX26Q7Z412 305 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 SPATA4Q8NEY3 305 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 TBC1D5Q92609 795 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 KIAA1683Q9H0B3 1180 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 DNAJC18Q9H819 358 aa10.05□□□□□ -0.8
SEMA4D-207ENST00000420987 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms