RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 PPP6R2O75170 966 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 BRD1O95696 1058 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 EOMESO95936 686 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 NAMPTP43490 491 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 MBTD1Q05BQ5 628 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 KARSQ15046 597 aaKnown RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 PTPROQ16827 1216 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 C1orf186Q6ZWK4 172 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 ECHDC2Q86YB7 292 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 CMTR2Q8IYT2 770 aaKnown RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 DEPTORQ8TB45 409 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 EPSTI1Q96J88 318 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 DRC1Q96MC2 740 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 RUSC1Q9BVN2 902 aa20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 RC3H2Q9HBD1 1191 aaKnown RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
ECHDC3-202ENST00000420401 PLCG1P19174 1290 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 GUCY2CP25092 1073 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 AXLP30530 894 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 RAB27AP51159 221 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 SLC12A3P55017 1021 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 SPECC1Q5M775 1068 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 CDCA2Q69YH5 1023 aaPredicted RBP20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 EP400NLQ6ZTU2 488 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 C17orf80Q9BSJ5 609 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 KCNG1Q9UIX4 513 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 RWDD3Q9Y3V2 267 aa20.11■□□□□ 0.81
ECHDC3-202ENST00000420401 NLRC5Q86WI3 1866 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 GRXCR2A6NFK2 248 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 TSPAN1O60635 241 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 HIP1RO75146 1068 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 HOXA11P31270 313 aaPredicted RBP20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 ABI1Q8IZP0 508 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 RNF169Q8NCN4 708 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 KCNG4Q8TDN1 519 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 BSNDQ8WZ55 320 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 RAD54LQ92698 747 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 CCDC51Q96ER9 411 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 PRIMPOLQ96LW4 560 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 C17orf75Q9HAS0 396 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 POLD4Q9HCU8 107 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 FAM105AQ9NUU6 356 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 PRMT7Q9NVM4 692 aaPredicted RBP20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 COL4A6Q14031 1691 aa20.1■□□□□ 0.81
ECHDC3-202ENST00000420401 TBKBP1A7MCY6 615 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 DDIT3P35638 169 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 MRE11P49959 708 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 EFNA5P52803 228 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 DMP1Q13316 513 aaPredicted RBP20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 MAPK6Q16659 721 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 PAN2Q504Q3 1202 aaKnown RBP20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 NOTUMQ6P988 496 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 USP49Q70CQ1 688 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 TMEM192Q8IY95 271 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 MRPL38Q96DV4 380 aaKnown RBP20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 FAM50BQ9Y247 325 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
ECHDC3-202ENST00000420401 CCDC169A6NNP5 214 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 H3BQ06 376 aaPredicted RBP20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 DCXO43602 365 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 ZNF623O75123 536 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 FGFR1P11362 822 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 GATMP50440 423 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 PEX3P56589 373 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 DNM1Q05193 864 aaKnown RBP20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 EPC2Q52LR7 807 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 TIGD5Q53EQ6 642 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 RRAGBQ5VZM2 374 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 ZNF598Q86UK7 904 aaKnown RBP20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 CLP1Q92989 425 aaKnown RBP20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 PGBD4Q96DM1 585 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 TMEM117Q9H0C3 514 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 FZD8Q9H461 694 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 BLOC1S4Q9NUP1 217 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 STK17AQ9UEE5 414 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 PCDHB2Q9Y5E7 798 aa20.08■□□□□ 0.81
ECHDC3-202ENST00000420401 PHLPP2Q6ZVD8 1323 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 CUTAO60888 179 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 KRT18P05783 430 aaKnown RBP20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 RB1P06400 928 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 RAD51AP2Q09MP3 1159 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 MCM6Q14566 821 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 AMHR2Q16671 573 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 FAM187BQ17R55 369 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 GPBP1Q86WP2 473 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 DAW1Q8N136 415 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 CNNM3Q8NE01 707 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 RSPH1Q8WYR4 309 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 LARP4BQ92615 738 aaKnown RBP20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 CPB2Q96IY4 423 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 KMT5AQ9NQR1 393 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
ECHDC3-202ENST00000420401 ARF4P18085 180 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms