RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TMEM39BQ9GZU3 492 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 FARP1Q9Y4F1 1045 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 SLC26A4O43511 780 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 EYA4O95677 639 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 NDUFB10O96000 172 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 YWHABP31946 246 aaKnown RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 NAALADL2Q58DX5 795 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 RGMBQ6NW40 437 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 AFG1LQ8WV93 481 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 CHMP6Q96FZ7 201 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 LRRC37A3O60309 1634 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 M0QYV0 167 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 ENC1O14682 589 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 CD2BP2O95400 341 aaKnown RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 FTCDO95954 541 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 BAATQ14032 418 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 MXD4Q14582 209 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 SLMAPQ14BN4 828 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 MMEL1Q495T6 779 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 IER5Q5VY09 327 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 KRT39Q6A163 491 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 LMNTD2Q8IXW0 634 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 MRIQ9BWK5 157 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 MAGEB2O15479 319 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 TTI1O43156 1089 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 NDUFA10O95299 355 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 TDP2O95551 362 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 GGPS1O95749 300 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 SRRM1Q8IYB3 904 aaKnown RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 SUCLA2Q9P2R7 463 aaPredicted RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 AGO2Q9UKV8 859 aaKnown RBP9.03□□□□□ -0.96
UBR4-206ENST00000419533 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
UBR4-206ENST00000419533 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 PRKCBP05771 671 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.96
UBR4-206ENST00000419533 RALAP11233 206 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 CA4P22748 312 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 SDC4P31431 198 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 PPP4CP60510 307 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 PDIA5Q14554 519 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 YAF2Q8IY57 180 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 KLC2Q9H0B6 622 aa9.02□□□□□ -0.96
UBR4-206ENST00000419533 RBAKQ9NYW8 714 aaPredicted RBP9.02□□□□□ -0.96
UBR4-206ENST00000419533 CNOT8Q9UFF9 292 aaKnown RBP9.02□□□□□ -0.96
UBR4-206ENST00000419533 FNDC3AQ9Y2H6 1198 aaKnown RBP9.02□□□□□ -0.96
UBR4-206ENST00000419533 HIP1RO75146 1068 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 DGAT1O75907 488 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 RARBP10826 455 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TADA2BQ86TJ2 420 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 PYCARDQ9ULZ3 195 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 MAGED2Q9UNF1 606 aaPredicted RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 PIN4Q9Y237 131 aaKnown RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 A8MXQ7 604 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 MIF4GDA9UHW6 222 aaKnown RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 CXCL11O14625 94 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 APOEP02649 317 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 CYP2B6P20813 491 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 PCK1P35558 622 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 EPHB4P54760 987 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 PLTPP55058 493 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 DUOXA2Q1HG44 320 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 NBPF9Q3BBW0 867 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 PPP6R3Q5H9R7 873 aaPredicted RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 PRAMEF18Q5VWM3 479 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 KLC3Q6P597 504 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TTC30AQ86WT1 665 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 RNF149Q8NC42 400 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TNIP3Q96KP6 325 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 USH1CQ9Y6N9 552 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 HMGB1P1B2RPK0 211 aaPredicted RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 CLGNO14967 610 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TBX3O15119 743 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 MYBL1P10243 752 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 GPC5P78333 572 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 PPARDQ03181 441 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 PDIK1LQ8N165 341 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 DEPDC1BQ8WUY9 529 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 RABGGTAQ92696 567 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 EXOC4Q96A65 974 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 VPS39Q96JC1 886 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 CHAMP1Q96JM3 812 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 RTFDC1Q9BY42 306 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms