RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CCDC62Q6P9F0 684 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PDZD3Q86UT5 571 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 MAP4K3Q8IVH8 894 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 SAMD3Q8N6K7 520 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 KLHL23Q8NBE8 558 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 GOLM1Q8NBJ4 401 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 OR6J1Q8NGC5 347 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 COPS5Q92905 334 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 BRF1Q92994 677 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 USP26Q9BXU7 913 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 NRSN2Q9GZP1 204 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PRDM5Q9NQX1 630 aaPredicted RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
HMGN1-205ENST00000419378 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 ELP1O95163 1332 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 FRMPD4Q14CM0 1322 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 KIAA1217Q5T5P2 1943 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 NID2Q14112 1375 aa7.95□□□□□ -1.14
HMGN1-205ENST00000419378 A0A1W2PPC1 479 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 TRIM43BA6NCK2 446 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 ARVCFO00192 962 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 ZEB2O60315 1214 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 EIF3JO75822 258 aaKnown RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 CABYRO75952 493 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 CLTBP09497 229 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 MYCLP12524 364 aaPredicted RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 MAOBP27338 520 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 CPT1AP50416 773 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 METAP2P50579 478 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 ARHGAP1Q07960 439 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 ZNF252P-AS1Q0IIN9 211 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 APOBRQ0VD83 1088 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 GNL2Q13823 731 aaKnown RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 SEPT6Q14141 434 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 PGM5Q15124 567 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 POU4F3Q15319 338 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 SEPT14Q6ZU15 432 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 ANKRD33Q7Z3H0 272 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 HEATR3Q7Z4Q2 680 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 TRIM42Q8IWZ5 723 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 FBXL16Q8N461 479 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 DTWD1Q8N5C7 304 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 IL31RAQ8NI17 732 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 TRIM43Q96BQ3 446 aaPredicted RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 TOX2Q96NM4 488 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 PLVAPQ9BX97 442 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 AGXT2Q9BYV1 514 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 NAP1L2Q9ULW6 460 aaPredicted RBP7.94□□□□□ -1.14
HMGN1-205ENST00000419378 MROH7Q68CQ1 1323 aa7.94□□□□□ -1.14
HMGN1-205ENST00000419378 A0A0A0MRY4 1105 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 MEIS2O14770 477 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 ADAM11O75078 769 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 GH1P01241 217 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CTSBP07858 339 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CCND2P30279 289 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CD68P34810 354 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 BMP8BP34820 402 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CDK7P50613 346 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 FXR1P51114 621 aaKnown RBP eCLIP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 PSMC6P62333 389 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 ITGA7Q13683 1181 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 LY6KQ17RY6 165 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 FOXD4L6Q3SYB3 417 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 BRDTQ58F21 947 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 WWC2Q6AWC2 1192 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 USP17L6PQ6QN14 398 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 FOXD4L3Q6VB84 417 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 BNC2Q6ZN30 1099 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 RUFY3Q7L099 469 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 VSIG10LQ86VR7 867 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 FAM126BQ8IXS8 530 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 SLC43A3Q8NBI5 491 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 SMARCC2Q8TAQ2 1214 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CUL5Q93034 780 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 GPRASP2Q96D09 838 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 EAF1Q96JC9 268 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 LBHD1Q9BQE6 289 aaPredicted RBP7.93□□□□□ -1.14
HMGN1-205ENST00000419378 TM6SF1Q9BZW5 370 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 PSTPIP2Q9H939 334 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 GRIN2DO15399 1336 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 SCN10AQ9Y5Y9 1956 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CDH23Q9H251 3354 aa7.93□□□□□ -1.14
HMGN1-205ENST00000419378 CCDC196A0A1B0GTZ2 297 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 DCDC2CA8MYV0 355 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 GNB5O14775 395 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 KIAA0355O15063 1070 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 GREM1O60565 184 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 MMP3P08254 477 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 MYL3P08590 195 aa7.92□□□□□ -1.14
HMGN1-205ENST00000419378 ITGB8P26012 769 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms