RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 LRRC41Q15345 812 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 PTPN21Q16825 1174 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 ABCB5Q2M3G0 1257 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 SGMS1Q86VZ5 419 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 PHYKPLQ8IUZ5 450 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 C1orf210Q8IVY1 113 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 ZZZ3Q8IYH5 903 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 EXTL1Q92935 676 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
PTPRC-207ENST00000418674 DYDC2Q96IM9 177 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 C8orf48Q96LL4 319 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 SORCS2Q96PQ0 1159 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 CAMKK2Q96RR4 588 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 MPHOSPH9Q99550 1183 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 RTFDC1Q9BY42 306 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-207ENST00000418674 CSRNP2Q9H175 543 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 MS4A5Q9H3V2 200 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 AASDHPPTQ9NRN7 309 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 POLR3BQ9NW08 1133 aaPredicted RBP3.86□□□□□ -1.79
PTPRC-207ENST00000418674 ZIM2Q9NZV7 527 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 SYNPO2Q9UMS6 1093 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 RBM8AQ9Y5S9 174 aaKnown RBP3.86□□□□□ -1.79
PTPRC-207ENST00000418674 WASHC2AQ641Q2 1341 aa3.86□□□□□ -1.79
PTPRC-207ENST00000418674 LCHNA4D1U4 455 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 GOLGA8BA8MQT2 603 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 CAPN14A8MX76 684 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 CYP27B1O15528 508 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 MT-CO1P00395 513 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 MYBL2P10244 700 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 RBP3P10745 1247 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 CD40P25942 277 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 ADCY7P51828 1080 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 ANTXR2P58335 489 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 BPIFB4P59827 614 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 KRT85P78386 507 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 PTH1RQ03431 593 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 TCIRG1Q13488 830 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 PDCD1Q15116 288 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 MIIPQ5JXC2 388 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 TIGD7Q6NT04 549 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-207ENST00000418674 FRMD7Q6ZUT3 714 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 BMP8AQ7Z5Y6 402 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 CMIPQ8IY22 773 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 ANKRD53Q8N9V6 530 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 C1orf162Q8NEQ5 155 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-207ENST00000418674 LMBR1Q8WVP7 490 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 ZNF503Q96F45 646 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 WDR92Q96MX6 357 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 AGO3Q9H9G7 860 aaKnown RBP3.85□□□□□ -1.79
PTPRC-207ENST00000418674 AURKAIP1Q9NWT8 199 aaPredicted RBP3.85□□□□□ -1.79
PTPRC-207ENST00000418674 GIT1Q9Y2X7 761 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 NOC2LQ9Y3T9 749 aaKnown RBP3.85□□□□□ -1.79
PTPRC-207ENST00000418674 HS3ST3A1Q9Y663 406 aa3.85□□□□□ -1.79
PTPRC-207ENST00000418674 C2orf78A6NCI8 922 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 TRIM75PA6NK02 468 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 NPIPB8E9PQR5 432 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 DAPK3O43293 454 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 KDM1AO60341 852 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 RFPL1O75677 317 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 APOL3O95236 402 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 CFBP00751 764 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 GPR3P46089 330 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 HMGA2P52926 109 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 SCAND1P57086 179 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ADCY2Q08462 1091 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 CRHR2Q13324 411 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 MYBPC3Q14896 1274 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 PCBP2Q15366 365 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 LSM12Q3MHD2 195 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 GAGE13Q4V321 117 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 KRT40Q6A162 431 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 WDR75Q8IWA0 830 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ZFPM1Q8IX07 1006 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 CHPFQ8IZ52 775 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 THEMISQ8N1K5 641 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ANKRD35Q8N283 1001 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 PLA2G15Q8NCC3 412 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 RTF1Q92541 710 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 NKD2Q969F2 451 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ZNF496Q96IT1 587 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 FAXDC2Q96IV6 333 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 RPL10LQ96L21 214 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ORAI2Q96SN7 254 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 CHMP4AQ9BY43 222 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 RHOBTB2Q9BYZ6 727 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 TCF7L1Q9HCS4 588 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 GEMIN8Q9NWZ8 242 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 USP36Q9P275 1121 aaKnown RBP3.84□□□□□ -1.79
PTPRC-207ENST00000418674 DNAI1Q9UI46 699 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 ZNF180Q9UJW8 692 aa3.84□□□□□ -1.79
PTPRC-207ENST00000418674 GOLGA8AA7E2F4 631 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 PCDHGA12O60330 932 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 PRPF6O94906 941 aaKnown RBP3.83□□□□□ -1.8
PTPRC-207ENST00000418674 RECQLP46063 649 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-207ENST00000418674 ABHD18Q0P651 414 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 SAFB2Q14151 953 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPRC-207ENST00000418674 TMEM240Q5SV17 173 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 FAM102BQ5T8I3 360 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 NXNQ6DKJ4 435 aa3.83□□□□□ -1.8
PTPRC-207ENST00000418674 KIAA1841Q6NSI8 718 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms