RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PARD3BQ8TEW8 1205 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 SEPT1Q8WYJ6 367 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 GOLGA1Q92805 767 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 MS4A4AQ96JQ5 239 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 MORF4L1Q9UBU8 362 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 DIS3Q9Y2L1 958 aaKnown RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 JRKLQ9Y4A0 524 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 PCDHGC5Q9Y5F6 944 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CAPN6Q9Y6Q1 641 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 DUSP10Q9Y6W6 482 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 V9GYY5 206 aaPredicted RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 DOCK3Q8IZD9 2030 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 A0A0A6YYK5 440 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 IGKV6-21A0A0C4DH24 114 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 RBM47A0AV96 593 aaKnown RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ASB14A6NK59 587 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 EVI5O60447 810 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 MAFO75444 373 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ARIH2O95376 493 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 CCDC172P0C7W6 258 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 CETPP11597 493 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 GLRA2P23416 452 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SLC26A2P50443 739 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 MXI1P50539 228 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 POLGP54098 1239 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SOX10P56693 466 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 CLDN10P78369 228 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SP4Q02446 784 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ITIH3Q06033 890 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 CYP24A1Q07973 514 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 DRAP1Q14919 205 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SNRNP35Q16560 246 aaKnown RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 MTERF2Q49AM1 385 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 EAPPQ56P03 285 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SMYD5Q6GMV2 418 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 FBXO38Q6PIJ6 1188 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ANKRD23Q86SG2 305 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 GPD1LQ8N335 351 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ZSWIM2Q8NEG5 633 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SLC30A5Q8TAD4 765 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ASAP3Q8TDY4 903 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 RPGRIP1Q96KN7 1286 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 NOX5Q96PH1 765 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 ALS2CR12Q96Q35 445 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 GPR20Q99678 358 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 KIFC3Q9BVG8 833 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 PCIF1Q9H4Z3 704 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 MLXIPQ9HAP2 919 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 KIAA1586Q9HCI6 787 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 TMEM8AQ9HCN3 771 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 NRBP2Q9NSY0 501 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SALL4Q9UJQ4 1053 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 TSKSQ9UJT2 592 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 DNAJC12Q9UKB3 198 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 SAR1BQ9Y6B6 198 aa9.84□□□□□ -0.83
LINCMD1-201ENST00000418518 NCANO14594 1321 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 RALGAPA2Q2PPJ7 1873 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 MACROD2A1Z1Q3 448 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 TCF7P36402 384 aaPredicted RBP9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 GCLCP48506 637 aaPredicted RBP9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 GPC3P51654 580 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 STAT5BP51692 787 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 GTF2A2P52657 109 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 DLG4P78352 724 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CCNA1P78396 465 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CKAP4Q07065 602 aaKnown RBP9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CETN1Q12798 172 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 GPR162Q16538 588 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 ZNF792Q3KQV3 632 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CDCA2Q69YH5 1023 aaPredicted RBP9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 PHLDB3Q6NSJ2 640 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 GJB7Q6PEY0 223 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 C15orf39Q6ZRI6 1047 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 USP37Q86T82 979 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 VPS36Q86VN1 386 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CBWD2Q8IUF1 395 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 EXOC8Q8IYI6 725 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 ATP8B4Q8TF62 1192 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 SLC7A3Q8WY07 619 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 ADAMTS1Q9UHI8 967 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 NAGPAQ9UK23 515 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 SNX12Q9UMY4 172 aa9.83□□□□□ -0.84
LINCMD1-201ENST00000418518 CTAGE15A4D2H0 777 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 LRRIQ3A6PVS8 624 aaPredicted RBP9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 ZBTB42B2RXF5 422 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 BTBD19C9JJ37 291 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 DDX3XO00571 662 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 HNRNPDLO14979 420 aaKnown RBP9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 EXTL3O43909 919 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 ZC3H11AO75152 810 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 MOCS3O95396 460 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 PGK2P07205 417 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 TUBBP07437 444 aa9.82□□□□□ -0.84
LINCMD1-201ENST00000418518 CTAGE8P0CG41 777 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms