RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 DBR1Q9UK59 544 aaKnown RBP19.88■□□□□ 0.77
CPNE1-210ENST00000416778 BARX2Q9UMQ3 279 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-210ENST00000416778 PLXNA4Q9HCM2 1894 aa19.88■□□□□ 0.77
CPNE1-210ENST00000416778 TSPAN1O60635 241 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 OR52Z1P0C646 297 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 NCLP19338 710 aaKnown RBP19.87■□□□□ 0.77
CPNE1-210ENST00000416778 RPA1P27694 616 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 AXLP30530 894 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 CAPSQ13938 189 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 TFDP1Q14186 410 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 AMHR2Q16671 573 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 SMRP1Q8NCR6 262 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 NFKBIZQ9BYH8 718 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 C11orf16Q9NQ32 467 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 ENTPD7Q9NQZ7 604 aa19.87■□□□□ 0.77
CPNE1-210ENST00000416778 GPR37L1O60883 481 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 DDHD2O94830 711 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 CXCL14O95715 111 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 MBTD1Q05BQ5 628 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 TMEM173Q86WV6 379 aaPredicted RBP19.86■□□□□ 0.77
CPNE1-210ENST00000416778 CNNM3Q8NE01 707 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 IGSF21Q96ID5 467 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 LRFN3Q9BTN0 628 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 EIF2AQ9BY44 585 aaKnown RBP19.86■□□□□ 0.77
CPNE1-210ENST00000416778 S1PR5Q9H228 398 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 DNAJB4Q9UDY4 337 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 INPP5FQ9Y2H2 1132 aa19.86■□□□□ 0.77
CPNE1-210ENST00000416778 FSD2A1L4K1 749 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 C2orf71A6NGG8 1288 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 INO80B-WBP1J3KQ70 363 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 B4GALT3O60512 393 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 ZC3H11AO75152 810 aaKnown RBP eCLIP19.85■□□□□ 0.77
CPNE1-210ENST00000416778 ALDH2P05091 517 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 FXR2P51116 673 aaKnown RBP eCLIP19.85■□□□□ 0.772e-6■■■□□ 18.4
CPNE1-210ENST00000416778 NCBP1Q09161 790 aaKnown RBP19.85■□□□□ 0.77
CPNE1-210ENST00000416778 GNL2Q13823 731 aaKnown RBP19.85■□□□□ 0.77
CPNE1-210ENST00000416778 PDIA5Q14554 519 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 NBR1Q14596 966 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 ECM1Q16610 540 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 MAEAQ7L5Y9 396 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 DDX53Q86TM3 631 aaKnown RBP19.85■□□□□ 0.77
CPNE1-210ENST00000416778 CPB2Q96IY4 423 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 CSRNP2Q9H175 543 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 POLR3FQ9H1D9 316 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-210ENST00000416778 RSAD1Q9HA92 442 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 UBN1Q9NPG3 1134 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 GPRC5CQ9NQ84 441 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 KANSL3Q9P2N6 904 aa19.85■□□□□ 0.77
CPNE1-210ENST00000416778 CNTNAP2Q9UHC6 1331 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 CARNS1A5YM72 827 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 USO1O60763 962 aaKnown RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 ERLIN2O94905 339 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 ARF4P18085 180 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 SLC11A1P49279 550 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 RNASELQ05823 741 aaKnown RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 SMC1AQ14683 1233 aaKnown RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 NOTUMQ6P988 496 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 VPS52Q8N1B4 723 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 ERMNQ8TAM6 284 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 BCL7CQ8WUZ0 217 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 CCDC51Q96ER9 411 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 TMEM169Q96HH4 297 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 TMX3Q96JJ7 454 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 MIOSQ9NXC5 875 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 RAPGEFL1Q9UHV5 662 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 NOL7Q9UMY1 257 aaKnown RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 USP15Q9Y4E8 981 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-210ENST00000416778 IPPQ9Y573 584 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 PCDHB6Q9Y5E3 794 aa19.84■□□□□ 0.77
CPNE1-210ENST00000416778 A0A1B0GUA9 196 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 ST18O60284 1047 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 CD2BP2O95400 341 aaKnown RBP19.83■□□□□ 0.77
CPNE1-210ENST00000416778 ITGA4P13612 1032 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 ALADP13716 330 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 CYP11B2P19099 503 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 MUTP22033 750 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 PTGDRQ13258 359 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 TMEM31Q5JXX7 168 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 ANKRD54Q6NXT1 300 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 SYCE2Q6PIF2 218 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 POTEGQ6S5H5 508 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 PADI6Q6TGC4 694 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 MCPH1Q8NEM0 835 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 URGCPQ8TCY9 931 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 SUSD6Q92537 303 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 GBP3Q9H0R5 595 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 HES2Q9Y543 173 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 IRAK3Q9Y616 596 aa19.83■□□□□ 0.77
CPNE1-210ENST00000416778 INPPL1O15357 1258 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 B4GALT5O43286 388 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 CLASP2O75122 1294 aaKnown RBP19.82■□□□□ 0.76
CPNE1-210ENST00000416778 POMCP01189 267 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 IL17AQ16552 155 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 POP1Q99575 1024 aaKnown RBP19.82■□□□□ 0.76
CPNE1-210ENST00000416778 TMEM175Q9BSA9 504 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 VN1R3Q9BXE9 311 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 ZBP1Q9H171 429 aa19.82■□□□□ 0.76
CPNE1-210ENST00000416778 FZD8Q9H461 694 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms