RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 RABGGTAQ92696 567 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 ZNF707Q96C28 371 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 FAM193BQ96PV7 902 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 UNC45AQ9H3U1 944 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 SPATA6Q9NWH7 488 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
LINC01238-201ENST00000416204 EPS15L1Q9UBC2 864 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 FAN1Q9Y2M0 1017 aa10.54□□□□□ -0.72
LINC01238-201ENST00000416204 CACNA1GO43497 2377 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 GOLGA8BA8MQT2 603 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 MSH4O15457 936 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 ZBTB43O43298 467 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 KINO60870 393 aaKnown RBP10.53□□□□□ -0.72
LINC01238-201ENST00000416204 GLUD1P00367 558 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 CYP3A4P08684 503 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 LAMP2P13473 410 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 GPC5P78333 572 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 SETQ01105 290 aaPredicted RBP10.53□□□□□ -0.72
LINC01238-201ENST00000416204 HTR4Q13639 388 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 UBXN2BQ14CS0 331 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC01238-201ENST00000416204 PLA2G4FQ68DD2 849 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 STAMQ92783 540 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 LENG9Q96B70 501 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 RPS6KC1Q96S38 1066 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 LSG1Q9H089 658 aaKnown RBP10.53□□□□□ -0.72
LINC01238-201ENST00000416204 CHST12Q9NRB3 414 aa10.53□□□□□ -0.72
LINC01238-201ENST00000416204 FAM217BQ9NTX9 383 aaPredicted RBP10.53□□□□□ -0.72
LINC01238-201ENST00000416204 KLF18A0A0U1RQI7 1052 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 GAS7O60861 476 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 SOD2P04179 222 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 ALDH2P05091 517 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 ADH1AP07327 375 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 KCNA4P22459 653 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 TARBP2Q15633 366 aaKnown RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 LPAL2Q16609 132 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 PARM1Q6UWI2 310 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 SGMS1Q86VZ5 419 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 REXO1Q8N1G1 1221 aaKnown RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 CMASQ8NFW8 434 aaPredicted RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 FGF14Q92915 247 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 MTA3Q9BTC8 594 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 HERC2P3Q9BVR0 1158 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 APOL6Q9BWW8 343 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 MINDY3Q9H8M7 445 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 RSAD1Q9HA92 442 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 RBM28Q9NW13 759 aaKnown RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 USP18Q9UMW8 372 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.73
LINC01238-201ENST00000416204 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.73
LINC01238-201ENST00000416204 LAMTOR5O43504 91 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 TGM5O43548 720 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 EDIL3O43854 480 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
LINC01238-201ENST00000416204 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 SKIP12755 728 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
LINC01238-201ENST00000416204 GLUD2P49448 558 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 ST3GAL2Q16842 350 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 UBXN11Q5T124 520 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 LRCH2Q5VUJ6 765 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 KIAA0319Q5VV43 1072 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 MIER3Q7Z3K6 550 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 GRASPQ7Z6J2 395 aaPredicted RBP10.51□□□□□ -0.73
LINC01238-201ENST00000416204 PHKBQ93100 1093 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 PGBD4Q96DM1 585 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 CEP89Q96ST8 783 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 KXD1Q9BQD3 176 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 NT5C3AQ9H0P0 336 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 RNF39Q9H2S5 420 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 CDV3Q9UKY7 258 aaKnown RBP10.51□□□□□ -0.73
LINC01238-201ENST00000416204 HES2Q9Y543 173 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 CACNA1IQ9P0X4 2223 aa10.51□□□□□ -0.73
LINC01238-201ENST00000416204 FAM170BA6NMN3 283 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ANHXE9PGG2 379 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF623O75123 536 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 STBD1O95210 358 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 CPA1P15085 419 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 FSHRP23945 695 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 MLH1P40692 756 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 DNM2P50570 870 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 RAB27AP51159 221 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 SCNN1GP51170 649 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 NPEPPSP55786 919 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 PFKFB3Q16875 520 aaPredicted RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 PRSS55Q6UWB4 352 aaPredicted RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 COLGALT2Q8IYK4 626 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ATRIPQ8WXE1 791 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 TMEM143Q96AN5 459 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
LINC01238-201ENST00000416204 GAD1Q99259 594 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms