RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CDC45O75419 566 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 TDP2O95551 362 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
DDX56-202ENST00000415758 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
DDX56-202ENST00000415758 HSPA4P34932 840 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 CYP26C1Q6V0L0 522 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 CCDC105Q8IYK2 499 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
DDX56-202ENST00000415758 FLCNQ8NFG4 579 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 URGCPQ8TCY9 931 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 RTP3Q9BQQ7 232 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 MRPL17Q9NRX2 175 aaKnown RBP17.26■□□□□ 0.35
DDX56-202ENST00000415758 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
DDX56-202ENST00000415758 NRP1O14786 923 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 PAPLNO95428 1278 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 EFEMP2O95967 443 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 AFF1P51825 1210 aaKnown RBP17.25■□□□□ 0.35
DDX56-202ENST00000415758 UBXN11Q5T124 520 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 SRGAP1Q7Z6B7 1085 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 EXOC8Q8IYI6 725 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
DDX56-202ENST00000415758 RSAD1Q9HA92 442 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 WNT16Q9UBV4 365 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 SSX2IPQ9Y2D8 614 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
DDX56-202ENST00000415758 INPPL1O15357 1258 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 SOD2P04179 222 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 QARSP47897 775 aaKnown RBP17.24■□□□□ 0.35
DDX56-202ENST00000415758 ERMP1Q7Z2K6 904 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 RNF168Q8IYW5 571 aaPredicted RBP17.24■□□□□ 0.35
DDX56-202ENST00000415758 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 FAM193BQ96PV7 902 aaPredicted RBP17.24■□□□□ 0.35
DDX56-202ENST00000415758 WDR6Q9NNW5 1121 aaKnown RBP17.24■□□□□ 0.35
DDX56-202ENST00000415758 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 DPP7Q9UHL4 492 aa17.24■□□□□ 0.35
DDX56-202ENST00000415758 SPDYE4A6NLX3 237 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 EML1O00423 815 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 DKC1O60832 514 aaKnown RBP eCLIP17.23■□□□□ 0.35
DDX56-202ENST00000415758 N4BP1O75113 896 aaKnown RBP17.23■□□□□ 0.35
DDX56-202ENST00000415758 C1RP00736 705 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
DDX56-202ENST00000415758 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
DDX56-202ENST00000415758 NPEPPSP55786 919 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
DDX56-202ENST00000415758 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 NPY5RQ15761 445 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 PLA2G4FQ68DD2 849 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 SIX5Q8N196 739 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 DTWD2Q8NBA8 298 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 CNNM3Q8NE01 707 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
DDX56-202ENST00000415758 RPS6KC1Q96S38 1066 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 MINDY3Q9H8M7 445 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 RXFP1Q9HBX9 757 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 NCOA5Q9HCD5 579 aaKnown RBP17.23■□□□□ 0.35
DDX56-202ENST00000415758 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
DDX56-202ENST00000415758 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 ASAP2O43150 1006 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 POMCP01189 267 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 P4HBP07237 508 aaKnown RBP17.22■□□□□ 0.35
DDX56-202ENST00000415758 ADH1AP07327 375 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 PSMA5P28066 241 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
DDX56-202ENST00000415758 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDX56-202ENST00000415758 KIAA0319Q5VV43 1072 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
DDX56-202ENST00000415758 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 PSPC1Q8WXF1 523 aaKnown RBP17.22■□□□□ 0.35
DDX56-202ENST00000415758 NXPE3Q969Y0 559 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 SEMA4AQ9H3S1 761 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 MAN1C1Q9NR34 630 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 EPS15L1Q9UBC2 864 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 DDX25Q9UHL0 483 aaKnown RBP17.22■□□□□ 0.35
DDX56-202ENST00000415758 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
DDX56-202ENST00000415758 MTCL1Q9Y4B5 1905 aaKnown RBP17.21■□□□□ 0.35
DDX56-202ENST00000415758 ZNF292O60281 2723 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 DOCK8Q8NF50 2099 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 TEX28O15482 410 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 GAS2O43903 313 aaKnown RBP17.21■□□□□ 0.35
DDX56-202ENST00000415758 DEXIO95424 95 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 URODP06132 367 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 SRGAP2CP0DJJ0 459 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 RFC5P40937 340 aa17.21■□□□□ 0.35
DDX56-202ENST00000415758 DSC1Q08554 894 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms